Variant report

Variant	rs62521241
Chromosome Location	chr8:118606574-118606575
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11995038	0.85[EUR][1000 genomes]
rs62521192	0.85[EUR][1000 genomes]
rs62521196	0.85[EUR][1000 genomes]
rs62521201	0.85[EUR][1000 genomes]
rs62521202	0.85[EUR][1000 genomes]
rs62521205	0.85[EUR][1000 genomes]
rs62521211	0.85[EUR][1000 genomes]
rs62521237	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62521238	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521239	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521242	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521244	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73704117	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019636	chr8:118598433-118946091	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv539734	chr8:118598433-118946091	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1028387	chr8:118602105-118640162	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118591600-118615000	Weak transcription	Aorta	Aorta
2	chr8:118604600-118606800	Enhancers	NH-A	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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