Variant report

Variant	rs62521205
Chromosome Location	chr8:118556653-118556654
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:118545219..118546968-chr8:118554750..118557380,2	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11995038	1.00[EUR][1000 genomes]
rs17667932	0.86[ASN][1000 genomes]
rs17667990	0.89[ASN][1000 genomes]
rs62521192	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62521196	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62521201	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62521202	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521204	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs62521211	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521230	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62521237	1.00[EUR][1000 genomes]
rs62521238	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521239	0.85[EUR][1000 genomes]
rs62521241	0.85[EUR][1000 genomes]
rs62521242	0.85[EUR][1000 genomes]
rs6993408	0.86[ASN][1000 genomes]
rs72672126	0.86[ASN][1000 genomes]
rs72672136	0.86[ASN][1000 genomes]
rs73704117	0.85[EUR][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118534400-118557600	Weak transcription	Fetal Brain Male	brain
2	chr8:118542000-118558600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr8:118546600-118557200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr8:118546600-118557600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr8:118546600-118557600	Weak transcription	Fetal Intestine Large	intestine
6	chr8:118546600-118558000	Weak transcription	Esophagus	oesophagus
7	chr8:118546600-118558000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr8:118546600-118558200	Weak transcription	Fetal Intestine Small	intestine
9	chr8:118546600-118558200	Weak transcription	Spleen	Spleen
10	chr8:118546600-118558400	Weak transcription	Rectal Smooth Muscle	rectum
11	chr8:118546600-118558600	Weak transcription	Primary B cells from cord blood	blood
12	chr8:118546600-118559400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr8:118546600-118561600	Weak transcription	Osteobl	bone
14	chr8:118546800-118557200	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr8:118546800-118558000	Weak transcription	Adipose Nuclei	Adipose
16	chr8:118546800-118561600	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr8:118546800-118562200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr8:118547000-118557000	Weak transcription	Fetal Muscle Leg	muscle
19	chr8:118547000-118557800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr8:118547400-118558400	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr8:118548000-118560400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
22	chr8:118548400-118558400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr8:118554200-118561600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr8:118554600-118556800	Weak transcription	Primary neutrophils fromperipheralblood	blood
25	chr8:118554600-118558400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr8:118554600-118558400	Weak transcription	Dnd41	blood
27	chr8:118555000-118561800	Weak transcription	Monocytes-CD14+_RO01746	blood
28	chr8:118555200-118558200	Weak transcription	Primary T cells from cord blood	blood
29	chr8:118555800-118557800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr8:118556200-118558200	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr8:118556400-118557000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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