Variant report

Variant	rs62521201
Chromosome Location	chr8:118547604-118547605
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11995038	1.00[EUR][1000 genomes]
rs17667932	0.84[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs17667990	0.86[ASN][1000 genomes]
rs62521192	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521196	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521202	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62521204	0.86[ASN][1000 genomes]
rs62521205	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62521211	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521230	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62521237	1.00[EUR][1000 genomes]
rs62521238	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521239	0.85[EUR][1000 genomes]
rs62521241	0.85[EUR][1000 genomes]
rs62521242	0.85[EUR][1000 genomes]
rs6993408	0.84[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs72672126	0.90[ASN][1000 genomes]
rs72672136	0.84[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73704117	0.85[EUR][1000 genomes]

No data

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118533800-118553800	Weak transcription	Stomach Mucosa	stomach
2	chr8:118534400-118557600	Weak transcription	Fetal Brain Male	brain
3	chr8:118535200-118550400	Weak transcription	K562	blood
4	chr8:118542000-118558600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr8:118544400-118549600	Weak transcription	Hela-S3	cervix
6	chr8:118544600-118549600	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr8:118546400-118547800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr8:118546400-118548200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr8:118546400-118548200	Strong transcription	Stomach Smooth Muscle	stomach
10	chr8:118546600-118548200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr8:118546600-118548200	Weak transcription	Ovary	ovary
12	chr8:118546600-118548400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr8:118546600-118548600	Strong transcription	Liver	Liver
14	chr8:118546600-118548600	Weak transcription	Placenta	Placenta
15	chr8:118546600-118549000	Weak transcription	Primary T cells from cord blood	blood
16	chr8:118546600-118549000	Weak transcription	Brain Anterior Caudate	brain
17	chr8:118546600-118549200	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr8:118546600-118549200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr8:118546600-118549400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr8:118546600-118549600	Weak transcription	Gastric	stomach
21	chr8:118546600-118549800	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr8:118546600-118550400	Weak transcription	Fetal Kidney	kidney
23	chr8:118546600-118550800	Weak transcription	Brain Cingulate Gyrus	brain
24	chr8:118546600-118551200	Weak transcription	Colonic Mucosa	Colon
25	chr8:118546600-118551600	Weak transcription	NHDF-Ad	bronchial
26	chr8:118546600-118552400	Weak transcription	Psoas Muscle	Psoas
27	chr8:118546600-118552600	Weak transcription	HSMMtube	muscle
28	chr8:118546600-118552800	Weak transcription	Small Intestine	intestine
29	chr8:118546600-118553000	Weak transcription	Right Ventricle	heart
30	chr8:118546600-118553200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr8:118546600-118553400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr8:118546600-118553400	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr8:118546600-118553400	Weak transcription	HUVEC	blood vessel
34	chr8:118546600-118553800	Weak transcription	Placenta Amnion	Placenta Amnion
35	chr8:118546600-118554000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
36	chr8:118546600-118554000	Weak transcription	Primary T helper cells PMA-I stimulated	--
37	chr8:118546600-118554200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr8:118546600-118554400	Weak transcription	Left Ventricle	heart
39	chr8:118546600-118554600	Weak transcription	Cortex derived primary cultured neurospheres	brain
40	chr8:118546600-118554600	Weak transcription	Fetal Muscle Trunk	muscle
41	chr8:118546600-118554800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
42	chr8:118546600-118554800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr8:118546600-118554800	Weak transcription	Pancreas	Pancrea
44	chr8:118546600-118555000	Weak transcription	Fetal Thymus	thymus
45	chr8:118546600-118555000	Weak transcription	Thymus	Thymus
46	chr8:118546600-118555000	Weak transcription	NHLF	lung
47	chr8:118546600-118555200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr8:118546600-118555200	Weak transcription	Fetal Stomach	stomach
49	chr8:118546600-118555200	Weak transcription	Rectal Mucosa Donor 31	rectum
50	chr8:118546600-118555800	Weak transcription	Duodenum Mucosa	Duodenum

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