The 2.0 version of rSNPBase

Variant report

Variant rs6484782
Chromosome Location chr11:35356721-35356722
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35339000-35358000 Weak transcription HepG2 liver
2 chr11:35348400-35358000 Weak transcription Hela-S3 cervix
3 chr11:35349200-35357000 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr11:35350400-35358200 Weak transcription Placenta Placenta
5 chr11:35351400-35357200 Enhancers Primary B cells from peripheral blood blood
6 chr11:35352800-35361600 Weak transcription Left Ventricle heart
7 chr11:35353000-35356800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr11:35353000-35361600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr11:35353800-35358400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr11:35353800-35359000 Weak transcription K562 blood
11 chr11:35354000-35359200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr11:35354000-35359800 Weak transcription Pancreas Pancrea
13 chr11:35354000-35367800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr11:35354400-35358000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr11:35354400-35366000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr11:35354600-35358000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr11:35354600-35358000 Weak transcription Brain Hippocampus Middle brain
18 chr11:35354600-35358800 Weak transcription Brain Anterior Caudate brain
19 chr11:35354600-35359000 Weak transcription Brain Cingulate Gyrus brain
20 chr11:35354600-35361600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr11:35354600-35366000 Weak transcription Brain Substantia Nigra brain
22 chr11:35354800-35363200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr11:35355600-35357000 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr11:35355600-35357400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr11:35355600-35357400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:35355800-35357200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr11:35356000-35356800 Enhancers HMEC breast
28 chr11:35356000-35357000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr11:35356000-35357000 Enhancers Muscle Satellite Cultured Cells --
30 chr11:35356000-35357200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:35356000-35357400 Enhancers Monocytes-CD14+_RO01746 blood
32 chr11:35356000-35357400 Enhancers NHDF-Ad bronchial
33 chr11:35356200-35356800 Enhancers HSMM muscle
34 chr11:35356200-35357400 Enhancers Primary monocytes fromperipheralblood blood
35 chr11:35356400-35358200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr11:35356400-35359000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr11:35356600-35356800 Enhancers NHEK skin
38 chr11:35356600-35356800 Enhancers NHLF lung
39 chr11:35356600-35357000 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015