Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:63223609..63225528-chr17:63228836..63231724,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1473921	0.81[ASN][1000 genomes]
rs1554050	0.83[ASN][1000 genomes]
rs16961703	0.86[EUR][1000 genomes]
rs16961868	0.85[EUR][1000 genomes]
rs1877823	0.82[ASN][1000 genomes]
rs4790953	0.83[ASN][1000 genomes]
rs4791214	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55820790	0.86[EUR][1000 genomes]
rs55864812	0.85[EUR][1000 genomes]
rs57333496	0.87[EUR][1000 genomes]
rs58931966	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62063085	0.85[EUR][1000 genomes]
rs6504288	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7212442	0.85[EUR][1000 genomes]
rs7213152	0.85[EUR][1000 genomes]
rs7221051	0.85[EUR][1000 genomes]
rs7221174	0.93[ASN][1000 genomes]
rs7221258	0.80[EUR][1000 genomes]
rs7342966	0.85[EUR][1000 genomes]
rs8066949	0.85[ASN][1000 genomes]
rs8066968	0.85[ASN][1000 genomes]
rs8067258	0.83[ASN][1000 genomes]
rs8078293	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8081457	0.80[ASN][1000 genomes]
rs9896491	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9905007	0.86[EUR][1000 genomes]
rs9905226	0.86[EUR][1000 genomes]
rs9916255	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9916525	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530764	chr17:62939944-63278472	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63225400-63231600	Weak transcription	Osteobl	bone
2	chr17:63228400-63230600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr17:63228400-63232400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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