Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:55287127..55289595-chr2:55348601..55351225,2	K562	blood:
2	chr2:55287997..55290069-chr2:55324008..55326423,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10084445	0.81[EUR][1000 genomes]
rs10170102	0.82[EUR][1000 genomes]
rs10175952	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10181115	0.82[EUR][1000 genomes]
rs10182203	0.84[EUR][1000 genomes]
rs10191774	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10197533	0.86[EUR][1000 genomes]
rs10198096	0.81[EUR][1000 genomes]
rs10206953	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10207701	0.81[AMR][1000 genomes]
rs11125554	0.84[EUR][1000 genomes]
rs13387710	0.81[AMR][1000 genomes]
rs13400353	0.88[EUR][1000 genomes]
rs13401780	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13416852	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17046567	0.81[EUR][1000 genomes]
rs17046569	0.81[EUR][1000 genomes]
rs56050833	1.00[ASN][1000 genomes]
rs58016152	1.00[ASN][1000 genomes]
rs60989108	0.81[EUR][1000 genomes]
rs6545469	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6744637	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6760773	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72912579	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7592869	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874155	chr2:55205262-55307646	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55278200-55288800	Weak transcription	Lung	lung
2	chr2:55278800-55288600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr2:55278800-55290800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr2:55279000-55290600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr2:55280000-55289000	Weak transcription	HepG2	liver
6	chr2:55287800-55292200	Weak transcription	Fetal Heart	heart
7	chr2:55288000-55290400	Weak transcription	K562	blood
8	chr2:55288200-55289600	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr2:55288400-55289400	Enhancers	Monocytes-CD14+_RO01746	blood

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