Variant report

Variant	rs6550947
Chromosome Location	chr3:25144071-25144072
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1104724	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12486699	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13072262	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1587427	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1587431	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1603988	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1603989	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1603990	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1603991	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1609491	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1609938	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2012334	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4568087	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4858141	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4858142	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4858699	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4858700	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4858701	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4858704	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6776699	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7628200	0.95[EUR][1000 genomes]
rs7630907	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9820612	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9827724	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9864928	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25142800-25144600	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links