Variant report
Variant | rs6592223 |
---|---|
Chromosome Location | chr11:84664704-84664705 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:84659697..84661496-chr11:84663828..84666456,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1073985 | 0.86[CHB][hapmap] |
rs1073987 | 0.86[CHB][hapmap] |
rs10792789 | 0.90[CHB][hapmap] |
rs10792790 | 0.90[CHB][hapmap] |
rs10792795 | 0.89[YRI][hapmap] |
rs10898333 | 0.90[CHB][hapmap] |
rs10898341 | 0.90[YRI][hapmap] |
rs11234251 | 0.90[CHB][hapmap];0.86[ASN][1000 genomes] |
rs11234262 | 0.81[CHB][hapmap];0.82[JPT][hapmap];0.93[YRI][hapmap] |
rs11234263 | 0.81[CHB][hapmap];0.86[JPT][hapmap];0.93[YRI][hapmap] |
rs182990 | 0.90[CHB][hapmap] |
rs2374579 | 0.86[CHB][hapmap] |
rs2444253 | 0.81[YRI][hapmap] |
rs2508322 | 0.87[YRI][hapmap] |
rs349063 | 0.84[YRI][hapmap] |
rs349069 | 0.83[YRI][hapmap] |
rs349088 | 0.81[CHB][hapmap];0.82[YRI][hapmap] |
rs35728575 | 0.86[ASN][1000 genomes] |
rs3851174 | 0.90[YRI][hapmap] |
rs3907015 | 0.89[YRI][hapmap] |
rs3933734 | 0.84[YRI][hapmap] |
rs4121472 | 0.81[YRI][hapmap] |
rs4121473 | 0.88[YRI][hapmap] |
rs473818 | 1.00[CEU][hapmap] |
rs506422 | 0.83[YRI][hapmap] |
rs550970 | 0.86[YRI][hapmap] |
rs573767 | 0.83[YRI][hapmap] |
rs608647 | 1.00[CEU][hapmap];0.85[CHB][hapmap];0.82[JPT][hapmap] |
rs616320 | 0.87[YRI][hapmap] |
rs634050 | 0.83[YRI][hapmap] |
rs635860 | 0.83[YRI][hapmap] |
rs652852 | 0.83[YRI][hapmap] |
rs653885 | 0.84[YRI][hapmap] |
rs6592225 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs6592229 | 0.90[YRI][hapmap] |
rs668816 | 0.85[CHB][hapmap];0.81[JPT][hapmap] |
rs7105774 | 0.83[YRI][hapmap] |
rs7108021 | 0.90[CHB][hapmap] |
rs7111336 | 0.87[YRI][hapmap] |
rs7112064 | 0.90[YRI][hapmap] |
rs7116405 | 0.83[ASN][1000 genomes] |
rs7125600 | 0.90[YRI][hapmap] |
rs7127826 | 0.84[YRI][hapmap] |
rs7482922 | 0.89[YRI][hapmap] |
rs7925898 | 0.80[YRI][hapmap] |
rs7929647 | 0.81[CHB][hapmap];0.83[JPT][hapmap];0.87[YRI][hapmap] |
rs7933636 | 0.95[CHB][hapmap];0.91[JPT][hapmap];0.80[YRI][hapmap] |
rs7949547 | 0.84[YRI][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv948410 | chr11:83918339-84812001 | Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv1045974 | chr11:84187214-84708462 | Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
3 | nsv1048051 | chr11:84419442-84784233 | Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv541109 | chr11:84419442-84784233 | Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
5 | nsv898041 | chr11:84642163-84722252 | Enhancers Weak transcription Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
6 | nsv430415 | chr11:84661652-84833852 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
7 | nsv1054310 | chr11:84661681-84702723 | Enhancers Weak transcription | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |