The 2.0 version of rSNPBase

Variant report

Variant rs6592459
Chromosome Location chr11:71788793-71788794
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:71754200-71789600 Weak transcription Fetal Brain Female brain
2 chr11:71771600-71789800 Weak transcription Fetal Brain Male brain
3 chr11:71778400-71789800 Weak transcription Brain Germinal Matrix brain
4 chr11:71779400-71790200 Weak transcription Thymus Thymus
5 chr11:71780600-71790800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr11:71781000-71790400 Weak transcription Primary T cells from cord blood blood
7 chr11:71781200-71789600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr11:71781600-71789400 Weak transcription Liver Liver
9 chr11:71781600-71789600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr11:71781800-71789800 Weak transcription Stomach Smooth Muscle stomach
11 chr11:71781800-71791000 Weak transcription Aorta Aorta
12 chr11:71782000-71789800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr11:71782000-71789800 Weak transcription Stomach Mucosa stomach
14 chr11:71782000-71790200 Weak transcription Ovary ovary
15 chr11:71783200-71789000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr11:71783400-71790000 Weak transcription Psoas Muscle Psoas
17 chr11:71783600-71789400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr11:71783600-71789400 Weak transcription Colon Smooth Muscle Colon
19 chr11:71783600-71789400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr11:71783600-71789600 Weak transcription Duodenum Mucosa Duodenum
21 chr11:71783600-71789800 Weak transcription Pancreas Pancrea
22 chr11:71783600-71790200 Weak transcription Rectal Smooth Muscle rectum
23 chr11:71783600-71790400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr11:71783600-71790800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr11:71783600-71790800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr11:71783800-71789000 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr11:71783800-71789200 Weak transcription HepG2 liver
28 chr11:71783800-71789400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr11:71783800-71789400 Weak transcription Brain Angular Gyrus brain
30 chr11:71783800-71789600 Weak transcription NHLF lung
31 chr11:71783800-71790000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr11:71783800-71790000 Weak transcription Esophagus oesophagus
33 chr11:71783800-71790000 Weak transcription Right Atrium heart
34 chr11:71783800-71790000 Weak transcription Right Ventricle heart
35 chr11:71783800-71790400 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr11:71783800-71790400 Weak transcription Left Ventricle heart
37 chr11:71783800-71790400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr11:71783800-71790600 Weak transcription H9 Cell Line embryonic stem cell
39 chr11:71783800-71790600 Weak transcription Gastric stomach
40 chr11:71784000-71789000 Weak transcription Osteobl bone
41 chr11:71784000-71789400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr11:71784000-71789400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:71784000-71789400 Weak transcription Muscle Satellite Cultured Cells --
44 chr11:71784000-71789400 Weak transcription HSMMtube muscle
45 chr11:71784000-71790200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr11:71784000-71790200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr11:71784000-71790200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr11:71784400-71789200 Weak transcription Fetal Lung lung
49 chr11:71784400-71789400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr11:71784400-71790400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015