Variant report

Variant rs1894003
Chromosome Location chr11:71750276-71750277
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:71740400-71750400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:71747200-71750400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:71747200-71750600 Enhancers Small Intestine intestine
4 chr11:71747800-71750400 Enhancers Sigmoid Colon Sigmoid Colon
5 chr11:71747800-71751200 Enhancers Spleen Spleen
6 chr11:71748000-71750800 Enhancers Placenta Placenta
7 chr11:71748000-71751000 Enhancers HUES48 Cell Line embryonic stem cell
8 chr11:71748000-71751200 Enhancers H1 Cell Line embryonic stem cell
9 chr11:71748400-71750600 Enhancers HMEC breast
10 chr11:71748400-71751200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:71748400-71751600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr11:71748600-71750800 Flanking Active TSS Brain Germinal Matrix brain
13 chr11:71748600-71751200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr11:71748600-71751200 Flanking Active TSS Fetal Lung lung
15 chr11:71748600-71751400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
16 chr11:71748600-71751400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:71748600-71751400 Flanking Active TSS Stomach Smooth Muscle stomach
18 chr11:71748800-71750600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:71748800-71750600 Enhancers Placenta Amnion Placenta Amnion
20 chr11:71748800-71750600 Genic enhancers Dnd41 blood
21 chr11:71748800-71751200 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr11:71748800-71751200 Flanking Active TSS Brain Angular Gyrus brain
23 chr11:71748800-71751200 Flanking Active TSS Brain Hippocampus Middle brain
24 chr11:71748800-71751200 Flanking Active TSS Thymus Thymus
25 chr11:71748800-71751400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr11:71748800-71751400 Flanking Active TSS Primary T cells from cord blood blood
27 chr11:71748800-71751400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
28 chr11:71748800-71751400 Flanking Active TSS Brain Cingulate Gyrus brain
29 chr11:71748800-71751400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr11:71748800-71751400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
31 chr11:71748800-71751400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
32 chr11:71748800-71751400 Flanking Active TSS Osteobl bone
33 chr11:71748800-71751600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
34 chr11:71748800-71751600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
35 chr11:71748800-71751800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:71748800-71751800 Flanking Active TSS Adipose Nuclei Adipose
37 chr11:71748800-71751800 Flanking Active TSS Fetal Brain Male brain
38 chr11:71748800-71751800 Flanking Active TSS Fetal Thymus thymus
39 chr11:71749000-71750400 Flanking Active TSS GM12878-XiMat blood
40 chr11:71749000-71750400 Enhancers NHEK skin
41 chr11:71749000-71750600 Flanking Active TSS Fetal Muscle Leg muscle
42 chr11:71749000-71750800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
43 chr11:71749000-71751200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:71749000-71751400 Flanking Active TSS Brain Anterior Caudate brain
45 chr11:71749000-71751400 Flanking Active TSS Brain Substantia Nigra brain
46 chr11:71749000-71751400 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr11:71749000-71753200 Active TSS Ovary ovary
48 chr11:71749200-71750400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
49 chr11:71749200-71751000 Flanking Active TSS Right Atrium heart
50 chr11:71749200-71751200 Flanking Active TSS Left Ventricle heart

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