Variant report

Variant	rs510925
Chromosome Location	chr11:71809500-71809501
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:71808840..71811674-chr11:71882236..71884134,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000255860	Chromatin interaction

Extended variants
information (count: 198 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:197)

rs_ID	r²[population]
rs10128658	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.87[ASN][1000 genomes]
rs10450664	0.82[CEU][hapmap];1.00[TSI][hapmap]
rs10501408	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs1055452	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs1057992	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs10736781	0.90[CHB][hapmap];0.92[JPT][hapmap]
rs10736783	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs10736786	0.83[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs10751189	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs10751191	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs10751193	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10793011	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs10793016	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs10898814	0.87[ASN][1000 genomes]
rs10898817	0.81[ASN][1000 genomes]
rs11235440	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[LWK][hapmap];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11235441	1.00[CEU][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes]
rs11235444	0.84[AMR][1000 genomes]
rs12272086	0.86[AMR][1000 genomes]
rs12272213	0.82[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12275171	1.00[CEU][hapmap];0.86[AMR][1000 genomes]
rs12283462	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12293195	1.00[CEU][hapmap];0.80[AMR][1000 genomes]
rs12293885	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs1541304	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs1541306	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1548348	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs1573500	0.85[ASN][1000 genomes]
rs1573501	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs1573502	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17161966	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs17161980	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs17161991	0.97[ASN][1000 genomes]
rs1791544	0.94[ASN][1000 genomes]
rs1806778	0.97[ASN][1000 genomes]
rs1892919	0.82[ASN][1000 genomes]
rs1892920	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs1892921	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1894003	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs1894004	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes]
rs1939242	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1939243	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1939245	0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1939247	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2155142	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs2155145	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs2187496	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs2250866	0.82[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2276384	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs2276396	0.84[AMR][1000 genomes]
rs2298456	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.85[ASN][1000 genomes]
rs2298457	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap]
rs2503	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs2508856	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes]
rs2508860	0.86[AMR][1000 genomes]
rs2511074	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2511075	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2511076	0.91[ASN][1000 genomes]
rs2511078	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2511079	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.81[YRI][hapmap];0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2511114	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2511116	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2511120	0.86[AMR][1000 genomes]
rs2511121	0.85[ASN][1000 genomes]
rs2511122	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs28504107	0.95[ASN][1000 genomes]
rs2885880	0.85[JPT][hapmap]
rs3018301	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3018302	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap]
rs3018304	0.92[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs3018308	0.93[ASN][1000 genomes]
rs3018310	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs3133230	0.89[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs3133233	0.89[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs3750907	0.84[AMR][1000 genomes]
rs3750908	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3793938	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3814721	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs4121395	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs4338555	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4378421	0.80[AMR][1000 genomes]
rs4387373	1.00[CEU][hapmap];0.93[JPT][hapmap];0.80[AMR][1000 genomes]
rs4477459	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs482013	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs482197	0.86[AMR][1000 genomes]
rs493065	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4943821	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs4944232	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs4944242	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs4944243	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs4944258	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs4944259	0.86[ASN][1000 genomes]
rs4945378	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs4945392	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs4945426	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs4945434	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.87[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4945435	0.92[ASN][1000 genomes]
rs495567	0.94[ASN][1000 genomes]
rs517837	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs541022	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs542752	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs547208	0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs548961	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs552966	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs560777	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs564294	0.80[AMR][1000 genomes]
rs567026	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes]
rs57025151	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs575831	1.00[CEU][hapmap];0.91[JPT][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes]
rs575871	1.00[CEU][hapmap];0.92[JPT][hapmap];0.82[AMR][1000 genomes]
rs577435	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes]
rs579320	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs585228	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs58991229	0.80[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs595062	1.00[CEU][hapmap];0.93[JPT][hapmap];0.86[AMR][1000 genomes]
rs597513	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs598835	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs60054591	0.86[AMR][1000 genomes]
rs607446	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs610004	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs610041	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs612255	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs615000	0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs627329	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs628025	0.84[AMR][1000 genomes]
rs636946	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs642573	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs642618	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs656640	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6592447	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs6592448	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs6592449	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs6592450	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs6592451	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap]
rs6592453	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs6592455	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs6592456	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs6592457	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs6592458	0.81[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs6592459	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs659513	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs661290	1.00[CEU][hapmap];0.93[JPT][hapmap];0.82[AMR][1000 genomes]
rs670802	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs671132	0.86[AMR][1000 genomes]
rs671681	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs673478	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.86[YRI][hapmap];0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs674319	0.80[AMR][1000 genomes]
rs675185	0.88[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs676721	0.89[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs677279	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs678193	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs679926	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs686340	1.00[CEU][hapmap];0.92[JPT][hapmap];0.84[AMR][1000 genomes]
rs7101701	0.95[ASN][1000 genomes]
rs7102192	0.82[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap]
rs7103210	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7106730	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs7111379	1.00[CEU][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes]
rs7113436	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs7113549	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7115513	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs7116188	0.97[ASN][1000 genomes]
rs7116495	0.83[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs7121080	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs7121260	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7123102	0.97[ASN][1000 genomes]
rs7123992	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7124000	0.92[ASN][1000 genomes]
rs7126394	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs7126838	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7127865	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7128317	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs7128974	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs73539529	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73539532	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs73543609	0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs73543612	0.86[AMR][1000 genomes]
rs73543633	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73543635	0.86[AMR][1000 genomes]
rs73543640	0.86[AMR][1000 genomes]
rs73543643	0.86[AMR][1000 genomes]
rs7480015	0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7924834	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs7925411	0.82[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs7925604	1.00[CEU][hapmap];0.93[JPT][hapmap]
rs7930142	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7930544	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.87[ASN][1000 genomes]
rs7930721	0.87[ASN][1000 genomes]
rs7930722	0.87[ASN][1000 genomes]
rs7931941	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7937515	0.81[CHB][hapmap];0.93[JPT][hapmap];0.88[ASN][1000 genomes]
rs7937582	0.82[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7948821	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap]
rs947932	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs949323	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs949325	0.85[ASN][1000 genomes]
rs949326	1.00[CEU][hapmap];0.84[JPT][hapmap];1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs510925	NUMA1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71792600-71812800	Weak transcription	Fetal Heart	heart
2	chr11:71792600-71813200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr11:71798000-71812200	Weak transcription	Fetal Brain Male	brain
4	chr11:71800400-71812000	Strong transcription	Primary T cells from cord blood	blood
5	chr11:71802800-71810000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:71803000-71810800	Strong transcription	Fetal Muscle Leg	muscle
7	chr11:71803600-71810200	Strong transcription	Stomach Smooth Muscle	stomach
8	chr11:71803800-71809800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
9	chr11:71803800-71810800	Strong transcription	Rectal Mucosa Donor 29	rectum
10	chr11:71803800-71811200	Strong transcription	Brain Angular Gyrus	brain
11	chr11:71804000-71812800	Strong transcription	Fetal Stomach	stomach
12	chr11:71804200-71810000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr11:71804200-71810200	Strong transcription	Fetal Muscle Trunk	muscle
14	chr11:71804200-71810400	Strong transcription	Adipose Nuclei	Adipose
15	chr11:71804200-71810400	Strong transcription	Brain Hippocampus Middle	brain
16	chr11:71804200-71810600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr11:71804200-71811200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr11:71804200-71811600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr11:71804200-71811600	Strong transcription	Gastric	stomach
20	chr11:71804200-71811800	Strong transcription	Brain Inferior Temporal Lobe	brain
21	chr11:71804200-71812200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:71804200-71812200	Strong transcription	Fetal Intestine Large	intestine
23	chr11:71804400-71809600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr11:71804400-71810400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr11:71804400-71810400	Strong transcription	Fetal Thymus	thymus
26	chr11:71804400-71810600	Strong transcription	Primary T cells fromperipheralblood	blood
27	chr11:71804400-71810600	Strong transcription	Liver	Liver
28	chr11:71804400-71811000	Strong transcription	Primary B cells from peripheral blood	blood
29	chr11:71804400-71811000	Strong transcription	Rectal Mucosa Donor 31	rectum
30	chr11:71804400-71811200	Strong transcription	Duodenum Mucosa	Duodenum
31	chr11:71804400-71811200	Strong transcription	Fetal Intestine Small	intestine
32	chr11:71804400-71811200	Strong transcription	Osteobl	bone
33	chr11:71804400-71811400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr11:71804400-71811400	Strong transcription	Cortex derived primary cultured neurospheres	brain
35	chr11:71804400-71811800	Strong transcription	Sigmoid Colon	Sigmoid Colon
36	chr11:71804400-71811800	Strong transcription	NHLF	lung
37	chr11:71804400-71812800	Strong transcription	HUES6 Cell Line	embryonic stem cell
38	chr11:71804400-71812800	Strong transcription	A549	lung
39	chr11:71804600-71810000	Strong transcription	Primary monocytes fromperipheralblood	blood
40	chr11:71804600-71810000	Strong transcription	Monocytes-CD14+_RO01746	blood
41	chr11:71804600-71810400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr11:71804600-71811600	Strong transcription	HUES64 Cell Line	embryonic stem cell
43	chr11:71804600-71811800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr11:71804600-71812600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr11:71804800-71811600	Strong transcription	Thymus	Thymus
46	chr11:71804800-71812000	Strong transcription	H1 Cell Line	embryonic stem cell
47	chr11:71805200-71810200	Strong transcription	Primary T helper cells fromperipheralblood	blood
48	chr11:71805200-71810200	Strong transcription	HSMMtube	muscle
49	chr11:71805200-71810600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr11:71805200-71810800	Strong transcription	Spleen	Spleen

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