Variant report

Variant rs686340
Chromosome Location chr11:71793212-71793213
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:71792000-71793600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr11:71792400-71793400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:71792400-71793400 Enhancers Primary neutrophils fromperipheralblood blood
4 chr11:71792400-71793400 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr11:71792400-71793400 Enhancers Brain Substantia Nigra brain
6 chr11:71792400-71793400 Enhancers Fetal Kidney kidney
7 chr11:71792400-71793400 Enhancers Lung lung
8 chr11:71792400-71793600 Enhancers Primary B cells from cord blood blood
9 chr11:71792400-71793600 Enhancers Primary B cells from peripheral blood blood
10 chr11:71792400-71793600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr11:71792400-71793600 Enhancers Stomach Mucosa stomach
12 chr11:71792400-71793600 Enhancers Hela-S3 cervix
13 chr11:71792400-71793800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr11:71792400-71793800 Enhancers Primary T cells from cord blood blood
15 chr11:71792400-71793800 Enhancers Primary hematopoietic stem cells blood
16 chr11:71792400-71794000 Enhancers Primary monocytes fromperipheralblood blood
17 chr11:71792400-71794000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr11:71792400-71796200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:71792400-71797000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr11:71792400-71798400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr11:71792400-71799000 Weak transcription Duodenum Mucosa Duodenum
22 chr11:71792400-71799000 Weak transcription Left Ventricle heart
23 chr11:71792400-71799200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr11:71792400-71799400 Weak transcription Ovary ovary
25 chr11:71792400-71802600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr11:71792400-71805200 Weak transcription HSMMtube muscle
27 chr11:71792400-71805800 Weak transcription Placenta Amnion Placenta Amnion
28 chr11:71792600-71793400 Enhancers Rectal Mucosa Donor 31 rectum
29 chr11:71792600-71793400 Enhancers HMEC breast
30 chr11:71792600-71793600 Enhancers Cortex derived primary cultured neurospheres brain
31 chr11:71792600-71793600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:71792600-71793600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:71792600-71793600 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr11:71792600-71793800 Enhancers Adipose Nuclei Adipose
35 chr11:71792600-71793800 Enhancers HUVEC blood vessel
36 chr11:71792600-71794000 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr11:71792600-71794000 Enhancers Monocytes-CD14+_RO01746 blood
38 chr11:71792600-71794200 Weak transcription Fetal Brain Male brain
39 chr11:71792600-71794400 Weak transcription Fetal Intestine Small intestine
40 chr11:71792600-71796200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr11:71792600-71796200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr11:71792600-71796200 Weak transcription Brain Hippocampus Middle brain
43 chr11:71792600-71796200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr11:71792600-71796200 Weak transcription Fetal Brain Female brain
45 chr11:71792600-71796600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr11:71792600-71796600 Weak transcription Brain Germinal Matrix brain
47 chr11:71792600-71796800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr11:71792600-71796800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr11:71792600-71796800 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr11:71792600-71796800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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