Variant report

Variant	rs7930142
Chromosome Location	chr11:71737016-71737017
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SMC3	chr11:71736016-71737555	SK-N-SH	brain:	n/a	chr11:71736323-71736337
2	CHD1	chr11:71736126-71737040	IMR90	lung:	n/a	n/a
3	MXI1	chr11:71736170-71737164	SK-N-SH	brain:	n/a	n/a

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:71735278..71739296-chr11:71791106..71793307,3	MCF-7	breast:
2	chr11:71736305..71737102-chr11:71894203..71895181,2	K562	blood:
3	chr11:71733604..71737833-chr11:71811997..71815389,3	MCF-7	breast:
4	chr11:71736992..71739760-chr11:71808437..71810726,3	MCF-7	breast:
5	chr11:71735775..71738006-chr11:71790062..71791994,2	MCF-7	breast:
6	chr11:71734724..71737619-chr11:71934939..71936763,2	MCF-7	breast:
7	chr11:71736279..71741735-chr11:71748156..71753835,11	MCF-7	breast:
8	chr11:71736115..71737039-chr11:71854770..71856004,4	MCF-7	breast:
9	chr11:71733947..71737964-chr11:71799047..71803336,5	MCF-7	breast:
10	chr11:71735259..71738046-chr11:71798702..71801474,2	MCF-7	breast:
11	chr11:71735248..71738213-chr11:71822405..71824486,2	MCF-7	breast:

No data

Variant related genes	Relation type
NUMA1	TF binding region
ENSG00000137497	Chromatin interaction
ENSG00000165458	Chromatin interaction
ENSG00000110200	Chromatin interaction
ENSG00000149357	Chromatin interaction
ENSG00000184154	Chromatin interaction
ENSG00000238768	Chromatin interaction

Extended variants
information (count: 204 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:202)

rs_ID	r²[population]
rs10128658	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10501408	0.92[YRI][hapmap]
rs1055452	0.85[JPT][hapmap];1.00[YRI][hapmap]
rs10736781	0.92[CHB][hapmap];0.92[JPT][hapmap];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10736782	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10736783	1.00[YRI][hapmap]
rs10736786	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10751189	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10751190	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10751191	0.92[YRI][hapmap]
rs10751193	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10793016	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10898814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10898817	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11235440	1.00[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11235441	0.92[YRI][hapmap]
rs12272213	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12275171	1.00[YRI][hapmap]
rs12283462	0.86[ASN][1000 genomes]
rs12293195	0.92[YRI][hapmap]
rs12293885	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1541306	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1548348	0.92[YRI][hapmap]
rs1573500	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1573502	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1629046	0.80[EUR][1000 genomes]
rs17161966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17161980	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17161991	0.86[ASN][1000 genomes]
rs1783959	0.81[EUR][1000 genomes]
rs1791544	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1806778	0.86[ASN][1000 genomes]
rs1892919	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1892920	0.92[YRI][hapmap]
rs1892921	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1894003	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1894004	0.92[YRI][hapmap]
rs1939242	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1939243	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939245	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939247	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2187496	0.92[JPT][hapmap];0.88[ASN][1000 genomes]
rs2250866	1.00[CHB][hapmap];0.85[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2276384	0.92[YRI][hapmap]
rs2298456	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2298457	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2363736	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2508578	0.80[EUR][1000 genomes]
rs2508856	0.92[YRI][hapmap]
rs2511074	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2511075	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2511076	0.87[ASN][1000 genomes]
rs2511078	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2511079	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2511114	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2511116	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2511122	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs2845857	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28504107	0.84[ASN][1000 genomes]
rs2885880	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3018301	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3018302	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs3018304	0.85[ASN][1000 genomes]
rs3018308	0.88[ASN][1000 genomes]
rs3018310	0.91[YRI][hapmap]
rs3133230	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3133233	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3750908	1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[YRI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3793938	1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[YRI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3814721	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3886589	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4121395	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4338555	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4387373	0.92[YRI][hapmap]
rs4479013	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4491255	0.86[ASN][1000 genomes]
rs474231	0.83[EUR][1000 genomes]
rs475959	0.80[EUR][1000 genomes]
rs482013	0.82[AFR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs493065	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4943821	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4944232	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4944242	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4944243	0.92[YRI][hapmap]
rs4944258	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944259	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4945340	0.84[EUR][1000 genomes]
rs4945353	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4945378	0.92[YRI][hapmap]
rs4945392	0.92[YRI][hapmap]
rs4945426	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945434	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945435	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs495567	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs499386	0.80[EUR][1000 genomes]
rs510925	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs514431	0.83[EUR][1000 genomes]
rs517837	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs519098	0.83[EUR][1000 genomes]
rs529522	0.80[EUR][1000 genomes]
rs541022	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs542752	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs547208	0.82[ASN][1000 genomes]
rs548961	0.81[AFR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs550230	0.83[EUR][1000 genomes]
rs552966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs558859	0.83[EUR][1000 genomes]
rs55972015	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs560777	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56097487	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs567026	0.92[YRI][hapmap]
rs57025151	0.82[AFR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs577435	0.92[YRI][hapmap]
rs579320	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs585228	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58991229	0.83[ASN][1000 genomes]
rs595062	0.92[YRI][hapmap]
rs596130	0.81[EUR][1000 genomes]
rs597513	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs598835	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs601865	0.80[EUR][1000 genomes]
rs607446	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs610004	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs610041	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs612255	0.92[YRI][hapmap]
rs615000	0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs618186	0.81[EUR][1000 genomes]
rs627329	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs636946	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs642573	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs642618	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs656640	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592447	0.92[YRI][hapmap]
rs6592448	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592449	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6592450	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592451	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592452	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592453	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592455	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6592456	0.92[YRI][hapmap]
rs6592458	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6592459	0.86[ASN][1000 genomes]
rs659513	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs661242	0.81[EUR][1000 genomes]
rs661290	0.92[YRI][hapmap]
rs670802	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs671681	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs673478	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.82[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs675185	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs676721	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs677279	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs678193	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs679926	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs680150	0.81[EUR][1000 genomes]
rs7101701	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7102192	0.92[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7103210	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7106730	0.85[JPT][hapmap]
rs7106748	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7111379	0.92[YRI][hapmap]
rs7113436	0.91[YRI][hapmap]
rs7113549	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7115513	0.92[YRI][hapmap]
rs7116188	0.86[ASN][1000 genomes]
rs7116495	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7121080	0.92[YRI][hapmap]
rs7121260	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7123102	0.86[ASN][1000 genomes]
rs7123992	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7124000	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7126394	0.92[YRI][hapmap]
rs7126838	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7127865	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7128317	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7128346	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7128974	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73531952	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73539529	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73539532	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73543609	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73543633	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7480015	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7924516	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7924834	0.83[JPT][hapmap];0.92[YRI][hapmap]
rs7925411	0.92[YRI][hapmap]
rs7925604	0.92[YRI][hapmap]
rs7925901	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7930544	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7930721	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7930722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931941	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7937515	0.92[JPT][hapmap]
rs7937582	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7943227	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7948821	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7949480	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7951194	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs947932	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs949323	0.92[YRI][hapmap]
rs949325	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs949326	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv428262	chr11:71363639-71804055	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	55 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7930142	NUMA1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71709800-71748000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:71710800-71743200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
3	chr11:71710800-71748000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr11:71711000-71741800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr11:71711000-71748800	Strong transcription	Dnd41	blood
6	chr11:71711200-71742400	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr11:71711400-71747600	Strong transcription	Fetal Thymus	thymus
8	chr11:71711600-71747800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr11:71711800-71737800	Strong transcription	Sigmoid Colon	Sigmoid Colon
10	chr11:71711800-71742800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr11:71711800-71743200	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr11:71711800-71744200	Strong transcription	Primary B cells from peripheral blood	blood
13	chr11:71712800-71741000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
14	chr11:71713400-71740800	Strong transcription	HepG2	liver
15	chr11:71713400-71741600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr11:71713800-71742400	Strong transcription	Primary hematopoietic stem cells	blood
17	chr11:71714600-71742400	Strong transcription	Hela-S3	cervix
18	chr11:71716600-71737200	Strong transcription	Spleen	Spleen
19	chr11:71725200-71741400	Strong transcription	Duodenum Mucosa	Duodenum
20	chr11:71725600-71747400	Strong transcription	Thymus	Thymus
21	chr11:71725800-71740200	Strong transcription	Gastric	stomach
22	chr11:71726600-71740400	Strong transcription	K562	blood
23	chr11:71727200-71740600	Strong transcription	Esophagus	oesophagus
24	chr11:71727800-71750200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr11:71730600-71748800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr11:71734200-71743000	Genic enhancers	Fetal Intestine Large	intestine
27	chr11:71734400-71744400	Genic enhancers	Fetal Intestine Small	intestine
28	chr11:71734600-71737600	Genic enhancers	NHEK	skin
29	chr11:71734600-71738600	Weak transcription	Stomach Mucosa	stomach
30	chr11:71734600-71743400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr11:71734800-71738200	Genic enhancers	Fetal Stomach	stomach
32	chr11:71735000-71739000	Genic enhancers	Duodenum Smooth Muscle	Duodenum
33	chr11:71735000-71740600	Genic enhancers	Colon Smooth Muscle	Colon
34	chr11:71735200-71738000	Genic enhancers	Brain Inferior Temporal Lobe	brain
35	chr11:71735400-71738000	Genic enhancers	Liver	Liver
36	chr11:71735400-71738000	Genic enhancers	Skeletal Muscle Male	skeletal muscle
37	chr11:71735400-71738200	Genic enhancers	Rectal Smooth Muscle	rectum
38	chr11:71735400-71739600	Weak transcription	Fetal Brain Male	brain
39	chr11:71735400-71740200	Genic enhancers	Brain Anterior Caudate	brain
40	chr11:71735400-71740400	Genic enhancers	Skeletal Muscle Female	skeletal muscle
41	chr11:71735400-71750000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr11:71735600-71737200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr11:71735600-71737400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr11:71735600-71737400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr11:71735600-71737600	Weak transcription	HUES48 Cell Line	embryonic stem cell
46	chr11:71735600-71737800	Weak transcription	H1 Cell Line	embryonic stem cell
47	chr11:71735600-71738200	Weak transcription	Pancreatic Islets	Pancreatic Islet
48	chr11:71735600-71738600	Genic enhancers	Adipose Nuclei	Adipose
49	chr11:71735600-71739600	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr11:71735600-71739800	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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