Variant report

Variant	rs6593427
Chromosome Location	chr10:45012008-45012009
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:45010054..45012679-chr10:45015102..45017224,2	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10450471	0.80[EUR][1000 genomes]
rs11239171	0.80[EUR][1000 genomes]
rs11591669	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11593138	0.80[EUR][1000 genomes]
rs11593437	0.99[ASN][1000 genomes]
rs11593439	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11593591	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11595472	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11595799	0.80[EUR][1000 genomes]
rs11596551	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11597734	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11598916	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12254926	0.80[EUR][1000 genomes]
rs12258288	0.80[EUR][1000 genomes]
rs12265349	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs1572202	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1585912	0.80[EUR][1000 genomes]
rs17156606	0.90[EUR][1000 genomes]
rs17407080	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17407137	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17407291	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17485517	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17485977	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17486117	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1977896	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1977897	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2184771	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28373082	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7068018	0.85[EUR][1000 genomes]
rs7075674	0.80[EUR][1000 genomes]
rs7084757	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795018	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72795026	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795029	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795030	0.99[ASN][1000 genomes]
rs72795035	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795036	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795038	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795039	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795042	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72795043	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72795057	0.85[ASN][1000 genomes]
rs72795059	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72795073	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72795075	0.90[EUR][1000 genomes]
rs72795078	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72795079	0.81[EUR][1000 genomes]
rs7898402	0.80[EUR][1000 genomes]
rs7898623	0.81[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs7905651	0.81[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45009400-45014400	Weak transcription	Ovary	ovary
2	chr10:45010000-45013800	Enhancers	Fetal Heart	heart
3	chr10:45011800-45013400	Enhancers	Fetal Stomach	stomach
4	chr10:45012000-45012600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
5	chr10:45012000-45012600	Enhancers	Right Ventricle	heart
6	chr10:45012000-45015400	Enhancers	Fetal Lung	lung

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