Variant report

Variant	rs11593439
Chromosome Location	chr10:45013916-45013917
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10450471	0.80[EUR][1000 genomes]
rs11239171	0.80[EUR][1000 genomes]
rs11591669	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11593138	0.80[EUR][1000 genomes]
rs11593437	1.00[ASN][1000 genomes]
rs11593591	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11595472	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11595799	0.80[EUR][1000 genomes]
rs11596551	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11597734	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11598916	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12254926	0.80[EUR][1000 genomes]
rs12258288	0.80[EUR][1000 genomes]
rs1572202	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1585912	0.80[EUR][1000 genomes]
rs17156606	0.90[EUR][1000 genomes]
rs17156636	0.80[ASN][1000 genomes]
rs17407080	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17407137	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17407291	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17408225	0.80[ASN][1000 genomes]
rs17485517	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17485977	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17486117	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1977896	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1977897	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2184771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28373082	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34071927	0.80[ASN][1000 genomes]
rs6593427	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7068018	0.85[EUR][1000 genomes]
rs7075674	0.80[EUR][1000 genomes]
rs7084757	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795018	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72795026	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795029	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795030	1.00[ASN][1000 genomes]
rs72795035	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795036	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795038	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795039	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795042	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72795043	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72795057	0.86[ASN][1000 genomes]
rs72795059	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72795073	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72795075	0.90[EUR][1000 genomes]
rs72795078	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72795079	0.81[EUR][1000 genomes]
rs7898402	0.80[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45009400-45014400	Weak transcription	Ovary	ovary
2	chr10:45012000-45015400	Enhancers	Fetal Lung	lung
3	chr10:45013800-45014800	Weak transcription	Fetal Heart	heart

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