Variant report

Variant	rs66506561
Chromosome Location	chr7:124428152-124428153
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:124427415..124429637-chr7:124440473..124441995,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs34065666	0.86[EUR][1000 genomes]
rs34721371	0.86[EUR][1000 genomes]
rs55654359	0.86[EUR][1000 genomes]
rs57883866	0.86[EUR][1000 genomes]
rs58302116	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59044225	0.86[EUR][1000 genomes]
rs59572327	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs59653477	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs59802163	0.86[EUR][1000 genomes]
rs60347835	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs60630082	0.82[AMR][1000 genomes]
rs66461363	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs66501705	0.93[AMR][1000 genomes]
rs66528014	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs66539836	0.86[EUR][1000 genomes]
rs66610287	1.00[AMR][1000 genomes]
rs66639470	0.86[EUR][1000 genomes]
rs66965758	0.86[EUR][1000 genomes]
rs67166441	0.86[EUR][1000 genomes]
rs67326132	0.86[EUR][1000 genomes]
rs67712588	0.93[AMR][1000 genomes]
rs67985498	0.86[EUR][1000 genomes]
rs68099817	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs6954402	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs73223509	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73223520	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs73223522	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs73223530	1.00[AMR][1000 genomes]
rs73225404	0.86[EUR][1000 genomes]
rs73443849	0.93[AMR][1000 genomes]
rs73443852	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7801681	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	esv3446198	chr7:124358002-124586856	Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124422600-124430800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr7:124427400-124430600	Weak transcription	Placenta	Placenta

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