The 2.0 version of rSNPBase

Variant report

Variant rs6704509
Chromosome Location chr1:175980993-175980994
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175946000-175996000 Weak transcription HMEC breast
2 chr1:175953800-175999600 Weak transcription Colonic Mucosa Colon
3 chr1:175954000-175987800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:175957000-175981200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:175957800-176022000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:175958000-175987800 Weak transcription Fetal Thymus thymus
7 chr1:175971400-175981200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:175971600-175981200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:175973600-176003400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:175974000-176003000 Weak transcription NH-A brain
11 chr1:175974400-175988200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:175974600-175981800 Weak transcription Stomach Smooth Muscle stomach
13 chr1:175974600-175988800 Weak transcription Pancreas Pancrea
14 chr1:175974600-176014200 Weak transcription Colon Smooth Muscle Colon
15 chr1:175975400-176003400 Weak transcription NHLF lung
16 chr1:175975600-175981200 Weak transcription Lung lung
17 chr1:175975600-175981400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:175975600-175988400 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:175975800-175988800 Weak transcription Ovary ovary
20 chr1:175975800-176016200 Weak transcription HSMMtube muscle
21 chr1:175976000-175981600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr1:175976400-175981000 Weak transcription Primary B cells from peripheral blood blood
23 chr1:175976400-175981000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:175976400-175996000 Weak transcription HUVEC blood vessel
25 chr1:175976400-176014400 Weak transcription Brain Angular Gyrus brain
26 chr1:175976600-176009400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:175976800-176046000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr1:175977400-175982200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:175977600-175981000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:175977600-175988000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:175978200-175981400 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:175978200-175985200 Strong transcription Primary monocytes fromperipheralblood blood
33 chr1:175978200-175985200 Weak transcription Fetal Heart heart
34 chr1:175978200-176001000 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:175978200-176003600 Weak transcription Small Intestine intestine
36 chr1:175978200-176007400 Weak transcription Brain Germinal Matrix brain
37 chr1:175978200-176050600 Weak transcription Aorta Aorta
38 chr1:175978400-175981000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:175978400-175981000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:175978400-175981000 Weak transcription Liver Liver
41 chr1:175978400-175981200 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:175978400-175981200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:175978400-175981200 Weak transcription Primary hematopoietic stem cells blood
44 chr1:175978400-175981200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:175978400-175981200 Weak transcription Fetal Intestine Large intestine
46 chr1:175978400-175981200 Weak transcription Fetal Muscle Trunk muscle
47 chr1:175978400-175981200 Weak transcription Fetal Muscle Leg muscle
48 chr1:175978400-175981200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:175978400-175981200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:175978400-175981400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015