Variant report

Variant	rs6738101
Chromosome Location	chr2:180478662-180478663
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:180477852..180480440-chr2:180482454..180484640,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11681178	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11901866	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13012626	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13014208	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1606815	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17768733	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17768920	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17819812	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17820073	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1877942	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1996240	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35427104	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35877676	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4893877	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4894114	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs66812964	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs67053349	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6743733	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs951424	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs954649	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180476600-180479400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr2:180476600-180479600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:180476600-180479600	Enhancers	Osteobl	bone
4	chr2:180476800-180479200	Enhancers	Fetal Heart	heart
5	chr2:180477000-180478800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr2:180477000-180478800	Enhancers	Adipose Nuclei	Adipose
7	chr2:180477000-180478800	Enhancers	Ovary	ovary
8	chr2:180477000-180479000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr2:180477200-180478800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr2:180477200-180478800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr2:180477200-180478800	Enhancers	Lung	lung
12	chr2:180477200-180478800	Enhancers	Right Atrium	heart
13	chr2:180477200-180479000	Enhancers	Rectal Smooth Muscle	rectum
14	chr2:180477200-180479800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr2:180477200-180480000	Enhancers	Placenta Amnion	Placenta Amnion
16	chr2:180477200-180480000	Enhancers	NHLF	lung
17	chr2:180477400-180479000	Enhancers	Placenta	Placenta
18	chr2:180477400-180488200	Weak transcription	Pancreas	Pancrea
19	chr2:180477600-180478800	Weak transcription	HSMMtube	muscle
20	chr2:180477800-180478800	Weak transcription	Fetal Lung	lung
21	chr2:180477800-180484200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr2:180478000-180483000	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr2:180478200-180478800	Enhancers	Colon Smooth Muscle	Colon
24	chr2:180478200-180479200	Flanking Active TSS	NHEK	skin
25	chr2:180478200-180479400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr2:180478200-180479600	Enhancers	HSMM	muscle
27	chr2:180478400-180478800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr2:180478400-180479000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr2:180478400-180479000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr2:180478400-180479400	Enhancers	Muscle Satellite Cultured Cells	--
31	chr2:180478600-180478800	Enhancers	Aorta	Aorta

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