Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12193715	1.00[ASN][1000 genomes]
rs12198459	1.00[ASN][1000 genomes]
rs12200125	1.00[ASN][1000 genomes]
rs12203809	1.00[ASN][1000 genomes]
rs12211677	1.00[ASN][1000 genomes]
rs12211918	1.00[ASN][1000 genomes]
rs12211979	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1768283	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55977741	1.00[ASN][1000 genomes]
rs602842	0.82[CEU][hapmap]
rs620102	0.93[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs632750	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs654476	0.87[CEU][hapmap]
rs655363	0.83[EUR][1000 genomes]
rs657961	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs660467	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs667815	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs671675	0.82[CEU][hapmap]
rs678182	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs683150	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs683620	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73001817	0.87[ASN][1000 genomes]
rs9397289	1.00[CHB][hapmap]
rs9478711	1.00[ASN][1000 genomes]
rs9480324	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9480328	1.00[ASN][1000 genomes]
rs9480329	1.00[CHB][hapmap];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830843	chr6:150517411-150691173	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150686400-150687800	Enhancers	Ovary	ovary

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