Variant report

Variant	rs9478711
Chromosome Location	chr6:150708928-150708929
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12193715	1.00[ASN][1000 genomes]
rs12198459	1.00[ASN][1000 genomes]
rs12200125	1.00[ASN][1000 genomes]
rs12203809	1.00[ASN][1000 genomes]
rs12211677	1.00[ASN][1000 genomes]
rs12211918	1.00[ASN][1000 genomes]
rs12211979	1.00[ASN][1000 genomes]
rs1768283	1.00[ASN][1000 genomes]
rs34257671	0.88[AMR][1000 genomes]
rs35209272	0.88[AMR][1000 genomes]
rs55977741	1.00[ASN][1000 genomes]
rs620102	1.00[ASN][1000 genomes]
rs632750	1.00[ASN][1000 genomes]
rs660467	1.00[ASN][1000 genomes]
rs667815	0.87[ASN][1000 genomes]
rs674414	1.00[ASN][1000 genomes]
rs678182	1.00[ASN][1000 genomes]
rs683150	0.87[ASN][1000 genomes]
rs683620	0.87[ASN][1000 genomes]
rs73001817	0.87[ASN][1000 genomes]
rs9480324	1.00[ASN][1000 genomes]
rs9480328	1.00[ASN][1000 genomes]
rs9480329	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150706200-150711800	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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