Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:76338514..76340857-chr2:76342428..76344349,2	K562	blood:
2	chr2:76291024..76293676-chr2:76337937..76340562,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10170802	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes]
rs12473082	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1524216	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1608586	1.00[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs1660568	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1808871	1.00[AFR][1000 genomes]
rs2083550	1.00[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs2901742	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs317288	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs317290	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs389241	0.81[EUR][1000 genomes]
rs390810	0.97[EUR][1000 genomes]
rs391688	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs393801	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs414148	0.94[EUR][1000 genomes]
rs421370	1.00[ASN][1000 genomes]
rs425915	0.91[EUR][1000 genomes]
rs426141	1.00[ASN][1000 genomes]
rs449418	0.91[EUR][1000 genomes]
rs4640412	0.97[EUR][1000 genomes]
rs6759874	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834265	chr2:76275611-76450728	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv999645	chr2:76317006-76451354	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv523475	chr2:76333150-76343190	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76338600-76340600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr2:76338800-76340600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr2:76339000-76340200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:76339000-76340600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr2:76339200-76340400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr2:76339200-76340400	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr2:76339200-76340400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr2:76339400-76340400	Weak transcription	HUES64 Cell Line	embryonic stem cell

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