Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:177708529..177710912-chr2:177735579..177738159,2	MCF-7	breast:
2	chr2:177712628..177715536-chr2:177734631..177736747,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000227098	Chromatin interaction

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10497471	1.00[EUR][1000 genomes]
rs11883773	1.00[EUR][1000 genomes]
rs11883984	1.00[EUR][1000 genomes]
rs11887083	1.00[EUR][1000 genomes]
rs11900453	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11900702	1.00[EUR][1000 genomes]
rs11900899	1.00[EUR][1000 genomes]
rs13003981	0.86[EUR][1000 genomes]
rs1358294	1.00[EUR][1000 genomes]
rs1529085	1.00[EUR][1000 genomes]
rs1581144	0.86[EUR][1000 genomes]
rs1581145	0.86[EUR][1000 genomes]
rs16864639	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16864653	1.00[EUR][1000 genomes]
rs16864656	1.00[EUR][1000 genomes]
rs16864661	1.00[EUR][1000 genomes]
rs16864693	1.00[EUR][1000 genomes]
rs16864700	1.00[EUR][1000 genomes]
rs16864711	1.00[EUR][1000 genomes]
rs16864728	1.00[EUR][1000 genomes]
rs57398349	1.00[EUR][1000 genomes]
rs58712667	1.00[EUR][1000 genomes]
rs6705984	0.93[EUR][1000 genomes]
rs6709423	1.00[EUR][1000 genomes]
rs6713010	0.86[EUR][1000 genomes]
rs6724100	1.00[EUR][1000 genomes]
rs6732706	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6740670	1.00[CEU][hapmap];0.91[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6757388	1.00[EUR][1000 genomes]
rs73026248	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73028294	1.00[EUR][1000 genomes]
rs73035083	1.00[EUR][1000 genomes]
rs874134	1.00[EUR][1000 genomes]
rs874135	1.00[EUR][1000 genomes]
rs874136	1.00[EUR][1000 genomes]
rs874416	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3050	chr2:177713430-177760533	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:177735400-177738000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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