Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:22937203..22939842-chr3:22940484..22942154,2	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11129095	0.95[ASN][1000 genomes]
rs1355736	0.93[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs1355737	0.93[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs1386008	0.85[EUR][1000 genomes]
rs1386009	0.85[EUR][1000 genomes]
rs1386010	0.85[EUR][1000 genomes]
rs1471840	0.84[EUR][1000 genomes]
rs1486334	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1552391	0.85[EUR][1000 genomes]
rs1552394	0.82[EUR][1000 genomes]
rs17012326	0.97[ASN][1000 genomes]
rs2129226	0.85[EUR][1000 genomes]
rs2359197	0.85[EUR][1000 genomes]
rs2840062	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4858462	0.85[EUR][1000 genomes]
rs4858464	0.96[YRI][hapmap]
rs6550714	0.85[EUR][1000 genomes]
rs6550715	0.85[EUR][1000 genomes]
rs6550716	0.85[EUR][1000 genomes]
rs9811411	0.85[EUR][1000 genomes]
rs9828032	0.91[YRI][hapmap]
rs9829835	0.95[ASN][1000 genomes]
rs9829858	0.97[ASN][1000 genomes]
rs9832202	0.95[ASN][1000 genomes]
rs9844125	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9862213	0.97[ASN][1000 genomes]
rs9870150	0.85[EUR][1000 genomes]
rs9870481	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9870770	0.85[EUR][1000 genomes]
rs9876819	0.85[EUR][1000 genomes]
rs9876828	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014828	chr3:22554271-23033498	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008306	chr3:22762892-23026548	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:22935800-22939600	Weak transcription	Psoas Muscle	Psoas
2	chr3:22936000-22939600	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:22936600-22939600	Weak transcription	Ovary	ovary
4	chr3:22938200-22939800	Enhancers	Colon Smooth Muscle	Colon
5	chr3:22938400-22940000	Enhancers	Fetal Lung	lung
6	chr3:22938600-22939800	Enhancers	Fetal Stomach	stomach
7	chr3:22938600-22939800	Enhancers	Rectal Smooth Muscle	rectum
8	chr3:22939000-22939800	Enhancers	Fetal Muscle Leg	muscle
9	chr3:22939200-22939600	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr3:22939200-22940000	Enhancers	Stomach Smooth Muscle	stomach
11	chr3:22939400-22939800	Flanking Active TSS	Fetal Brain Male	brain

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