Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:22771239..22772148-chr3:22928875..22929886,10	MCF-7	breast:
2	chr3:22605268..22606284-chr3:22928941..22929846,5	MCF-7	breast:
3	chr3:22771112..22772132-chr3:22928764..22929789,6	MCF-7	breast:
4	chr3:22130623..22131453-chr3:22928892..22930144,3	K562	blood:
5	chr3:22837465..22837989-chr3:22929309..22930132,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11129095	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1355736	0.80[EUR][1000 genomes]
rs1355737	0.80[EUR][1000 genomes]
rs1386008	0.81[EUR][1000 genomes]
rs1386009	0.81[EUR][1000 genomes]
rs1386010	0.81[EUR][1000 genomes]
rs1471840	0.80[EUR][1000 genomes]
rs1486334	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1552391	0.81[EUR][1000 genomes]
rs17012326	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2129226	0.81[EUR][1000 genomes]
rs2359197	0.81[EUR][1000 genomes]
rs2840062	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4858462	0.81[EUR][1000 genomes]
rs6550714	0.81[EUR][1000 genomes]
rs6550715	0.81[EUR][1000 genomes]
rs6550716	0.81[EUR][1000 genomes]
rs6795012	0.97[ASN][1000 genomes]
rs9811411	0.81[EUR][1000 genomes]
rs9829835	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9829858	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9832202	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9844125	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9870150	0.81[EUR][1000 genomes]
rs9870481	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9870770	0.81[EUR][1000 genomes]
rs9876819	0.81[EUR][1000 genomes]
rs9876828	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014828	chr3:22554271-23033498	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008306	chr3:22762892-23026548	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:22928400-22935000	Weak transcription	Ovary	ovary
2	chr3:22928800-22933600	Weak transcription	Fetal Muscle Leg	muscle
3	chr3:22929200-22929800	Enhancers	Fetal Lung	lung

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