Variant report

Variant	rs6798950
Chromosome Location	chr3:34036373-34036374
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1109973	0.83[EUR][1000 genomes]
rs1881938	0.81[EUR][1000 genomes]
rs4045199	0.81[EUR][1000 genomes]
rs4234229	0.82[EUR][1000 genomes]
rs4270459	0.81[EUR][1000 genomes]
rs4355233	0.83[EUR][1000 genomes]
rs4374481	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4678628	0.82[EUR][1000 genomes]
rs62250185	1.00[ASN][1000 genomes]
rs6763221	0.82[EUR][1000 genomes]
rs6766292	0.81[EUR][1000 genomes]
rs6776036	0.80[EUR][1000 genomes]
rs73050728	1.00[ASN][1000 genomes]
rs7628777	1.00[ASN][1000 genomes]
rs9809828	1.00[ASN][1000 genomes]
rs9834233	1.00[ASN][1000 genomes]
rs9843038	0.81[EUR][1000 genomes]
rs9863160	1.00[ASN][1000 genomes]
rs9868707	1.00[ASN][1000 genomes]
rs9870373	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522881	chr3:33736126-34241686	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34033600-34039800	Weak transcription	K562	blood
2	chr3:34035800-34045400	Weak transcription	NHLF	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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