The 2.0 version of rSNPBase

Variant report

Variant rs68115667
Chromosome Location chr2:98604613-98604614
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98585000-98608400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:98592200-98606200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr2:98593200-98606400 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr2:98595800-98606400 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:98596000-98609400 Weak transcription Muscle Satellite Cultured Cells --
6 chr2:98596200-98607800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr2:98596200-98607800 Weak transcription Lung lung
8 chr2:98596800-98608400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:98597000-98605600 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr2:98597000-98609800 Weak transcription Fetal Stomach stomach
11 chr2:98598200-98607800 Weak transcription Primary T cells fromperipheralblood blood
12 chr2:98598600-98606200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr2:98598600-98610400 Weak transcription Placenta Placenta
14 chr2:98599800-98606000 Weak transcription HSMM muscle
15 chr2:98600000-98607600 Weak transcription NHEK skin
16 chr2:98600200-98607800 Weak transcription Spleen Spleen
17 chr2:98600200-98609400 Weak transcription Rectal Smooth Muscle rectum
18 chr2:98600200-98611600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr2:98600400-98604800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr2:98600400-98605000 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr2:98600400-98606200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr2:98600400-98607600 Weak transcription Gastric stomach
23 chr2:98600400-98607800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:98600400-98609800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr2:98600400-98610200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:98601000-98606400 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:98601000-98607800 Weak transcription Pancreas Pancrea
28 chr2:98601000-98607800 Weak transcription Right Ventricle heart
29 chr2:98601000-98609200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:98601200-98606200 Weak transcription Left Ventricle heart
31 chr2:98601200-98609400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:98601800-98607600 Weak transcription Liver Liver
33 chr2:98602000-98605600 ZNF genes & repeats GM12878-XiMat blood
34 chr2:98602600-98606400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr2:98603000-98604800 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:98603000-98610000 Enhancers Primary B cells from peripheral blood blood
37 chr2:98603200-98606400 Weak transcription Stomach Mucosa stomach
38 chr2:98603400-98605200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr2:98603400-98605200 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr2:98603400-98606200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr2:98603400-98609200 Weak transcription Fetal Intestine Small intestine
42 chr2:98603400-98610000 Weak transcription Ovary ovary
43 chr2:98603600-98606200 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr2:98603600-98606200 Weak transcription Small Intestine intestine
45 chr2:98603600-98607600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr2:98603600-98607800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:98604000-98607800 Weak transcription Psoas Muscle Psoas
48 chr2:98604200-98604800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr2:98604200-98605600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:98604200-98606000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015