The 2.0 version of rSNPBase

Variant report

Variant rs6543111
Chromosome Location chr2:98424074-98424075
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98387800-98438200 Weak transcription H1 Cell Line embryonic stem cell
2 chr2:98399600-98429600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:98402000-98440400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr2:98402400-98428600 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr2:98405800-98459600 Weak transcription Stomach Mucosa stomach
6 chr2:98406200-98427200 Weak transcription K562 blood
7 chr2:98406400-98469200 Weak transcription A549 lung
8 chr2:98409000-98425000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:98409400-98484200 Weak transcription HUVEC blood vessel
10 chr2:98409600-98429800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr2:98409800-98425000 Weak transcription Fetal Brain Female brain
12 chr2:98409800-98485000 Weak transcription Hela-S3 cervix
13 chr2:98410000-98424800 Weak transcription Brain Germinal Matrix brain
14 chr2:98410000-98424800 Weak transcription Esophagus oesophagus
15 chr2:98410000-98425200 Weak transcription Gastric stomach
16 chr2:98410000-98425400 Weak transcription Pancreas Pancrea
17 chr2:98410000-98425800 Weak transcription NH-A brain
18 chr2:98410000-98427000 Weak transcription Brain Angular Gyrus brain
19 chr2:98410000-98427200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:98410000-98427200 Weak transcription Brain Substantia Nigra brain
21 chr2:98410000-98427400 Weak transcription HSMMtube muscle
22 chr2:98410000-98427800 Weak transcription Spleen Spleen
23 chr2:98410000-98435800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:98410000-98446000 Weak transcription Colonic Mucosa Colon
25 chr2:98410000-98456200 Weak transcription Thymus Thymus
26 chr2:98410000-98456800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:98410000-98456800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:98410000-98457400 Weak transcription Small Intestine intestine
29 chr2:98410200-98427200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:98410800-98432000 Weak transcription Fetal Intestine Small intestine
31 chr2:98411000-98429200 Strong transcription HSMM muscle
32 chr2:98411400-98427200 Weak transcription Fetal Brain Male brain
33 chr2:98414200-98426200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr2:98415200-98424800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:98416200-98424800 Weak transcription Aorta Aorta
36 chr2:98416400-98425400 Weak transcription Placenta Amnion Placenta Amnion
37 chr2:98418200-98425200 Weak transcription NHLF lung
38 chr2:98418400-98424800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr2:98420400-98424800 Weak transcription Osteobl bone
40 chr2:98420400-98427600 Weak transcription Fetal Kidney kidney
41 chr2:98421400-98427400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:98421600-98424800 Weak transcription Fetal Lung lung
43 chr2:98421800-98425000 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:98421800-98425000 Weak transcription Left Ventricle heart
45 chr2:98422000-98424200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr2:98422000-98424400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:98422000-98424400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr2:98422000-98424400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:98422000-98424800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr2:98422000-98424800 Weak transcription Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015