The 2.0 version of rSNPBase

Variant report

Variant rs6816856
Chromosome Location chr4:190867330-190867331
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:190862600-190868800 Weak transcription Lung lung
2 chr4:190862600-190868800 Weak transcription Pancreas Pancrea
3 chr4:190862600-190869800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:190862600-190881000 Weak transcription Spleen Spleen
5 chr4:190863000-190880800 Weak transcription Brain Angular Gyrus brain
6 chr4:190863200-190868800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr4:190863200-190868800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr4:190863200-190869800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr4:190863200-190869800 Weak transcription Left Ventricle heart
10 chr4:190863200-190873800 Weak transcription Placenta Placenta
11 chr4:190863200-190874600 Weak transcription Fetal Intestine Large intestine
12 chr4:190863200-190875600 Weak transcription Fetal Thymus thymus
13 chr4:190863200-190876000 Weak transcription Stomach Smooth Muscle stomach
14 chr4:190863200-190876400 Weak transcription Osteobl bone
15 chr4:190863200-190879400 Weak transcription Gastric stomach
16 chr4:190863200-190880400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr4:190863200-190880400 Weak transcription Fetal Intestine Small intestine
18 chr4:190863200-190880800 Weak transcription HSMMtube muscle
19 chr4:190863200-190882000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr4:190863400-190868800 Weak transcription Right Atrium heart
21 chr4:190863400-190875200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr4:190863600-190868800 Weak transcription Thymus Thymus
23 chr4:190863600-190869000 Weak transcription Primary T cells fromperipheralblood blood
24 chr4:190863600-190877200 Weak transcription Primary hematopoietic stem cells blood
25 chr4:190863600-190877200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr4:190863600-190878800 Weak transcription Brain Germinal Matrix brain
27 chr4:190863600-190882000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:190863800-190868000 Weak transcription Fetal Stomach stomach
29 chr4:190863800-190868800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr4:190863800-190868800 Weak transcription Right Ventricle heart
31 chr4:190863800-190868800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr4:190863800-190870200 Weak transcription Colonic Mucosa Colon
33 chr4:190863800-190876000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr4:190863800-190880200 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr4:190863800-190881000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr4:190864000-190875400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr4:190864000-190878400 Weak transcription A549 lung
38 chr4:190864200-190868600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:190864200-190868800 Weak transcription Primary monocytes fromperipheralblood blood
40 chr4:190864200-190877200 Weak transcription Brain Cingulate Gyrus brain
41 chr4:190864200-190879400 Weak transcription Fetal Muscle Leg muscle
42 chr4:190864800-190867600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:190865200-190867600 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr4:190865400-190867600 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr4:190866800-190867800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
46 chr4:190866800-190868200 Weak transcription Liver Liver
47 chr4:190866800-190868600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr4:190866800-190868600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr4:190866800-190868600 Weak transcription Adipose Nuclei Adipose
50 chr4:190866800-190870200 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015