Variant report

Variant	rs6821990
Chromosome Location	chr4:81314054-81314055
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10027362	0.83[AMR][1000 genomes]
rs10031438	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11099227	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11099231	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11099233	0.84[EUR][1000 genomes]
rs11099236	0.84[EUR][1000 genomes]
rs11099238	0.82[EUR][1000 genomes]
rs1156872	0.84[EUR][1000 genomes]
rs11723594	0.82[EUR][1000 genomes]
rs11724838	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11727411	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11729082	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11731757	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11736014	0.90[EUR][1000 genomes]
rs11736601	0.84[EUR][1000 genomes]
rs11929913	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11930816	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11932267	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11936436	0.85[EUR][1000 genomes]
rs11936703	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11938178	0.85[EUR][1000 genomes]
rs11939741	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11944059	0.83[EUR][1000 genomes]
rs12501575	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13108814	0.90[EUR][1000 genomes]
rs13129145	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17004891	0.82[EUR][1000 genomes]
rs17004906	0.82[EUR][1000 genomes]
rs1994982	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2047235	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2201531	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4693022	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55912262	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56267604	0.82[EUR][1000 genomes]
rs57025153	0.82[EUR][1000 genomes]
rs57686880	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60513752	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60554077	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61325136	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6534957	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6821676	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6842892	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72860771	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72860772	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72860777	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72860781	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72860789	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72860798	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72862015	0.82[EUR][1000 genomes]
rs7654257	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7670914	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7695356	0.90[EUR][1000 genomes]
rs7699572	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9307683	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9990885	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81308200-81314800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr4:81308600-81314600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:81314000-81314800	Enhancers	Osteobl	bone
4	chr4:81314000-81315000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr4:81314000-81315200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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