Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10024704	1.00[EUR][1000 genomes]
rs10025132	1.00[EUR][1000 genomes]
rs10028462	1.00[EUR][1000 genomes]
rs11132939	1.00[EUR][1000 genomes]
rs12108601	1.00[EUR][1000 genomes]
rs1484021	1.00[EUR][1000 genomes]
rs163075	1.00[EUR][1000 genomes]
rs234125	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28578805	1.00[EUR][1000 genomes]
rs28602395	1.00[EUR][1000 genomes]
rs335994	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4453902	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6816514	1.00[EUR][1000 genomes]
rs6818039	1.00[EUR][1000 genomes]
rs6835263	1.00[EUR][1000 genomes]
rs6849432	1.00[EUR][1000 genomes]
rs6852958	1.00[EUR][1000 genomes]
rs72984395	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72986322	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72986325	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72986326	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72988232	1.00[EUR][1000 genomes]
rs72988242	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72988257	0.83[AFR][1000 genomes]
rs72988264	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72995053	1.00[EUR][1000 genomes]
rs72995055	1.00[EUR][1000 genomes]
rs72995071	1.00[EUR][1000 genomes]
rs72997054	1.00[EUR][1000 genomes]
rs7666355	1.00[EUR][1000 genomes]
rs7675865	1.00[EUR][1000 genomes]
rs7688719	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7690422	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9993592	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031592	chr4:173112542-173662991	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537359	chr4:173112542-173662991	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534293	chr4:173121379-173606082	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173269400-173270000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr4:173269400-173270800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr4:173269600-173270000	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr4:173269800-173270400	Enhancers	HUES48 Cell Line	embryonic stem cell

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