Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10008442	0.94[ASN][1000 genomes]
rs10013582	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10013744	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10516476	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13102501	0.94[ASN][1000 genomes]
rs13118441	0.94[ASN][1000 genomes]
rs13122395	1.00[ASN][1000 genomes]
rs13130138	0.94[ASN][1000 genomes]
rs13131485	1.00[ASN][1000 genomes]
rs1390930	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1390933	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1390934	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17030481	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17030500	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17030502	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28701141	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35540482	1.00[ASN][1000 genomes]
rs35807447	1.00[ASN][1000 genomes]
rs58690640	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58926631	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59836380	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6419156	1.00[ASN][1000 genomes]
rs6532903	1.00[ASN][1000 genomes]
rs7655125	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7681227	1.00[ASN][1000 genomes]
rs7689536	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9991123	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931418	chr4:101500167-102443207	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:101740000-101745600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr4:101740800-101742000	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr4:101741200-101742600	Enhancers	GM12878-XiMat	blood
4	chr4:101741200-101744600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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