The 2.0 version of rSNPBase

Variant report

Variant rs6837546
Chromosome Location chr4:78001536-78001537
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77998200-78004200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr4:77998400-78004200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr4:77998400-78004400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr4:77998400-78013800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr4:77998400-78016800 Weak transcription Aorta Aorta
6 chr4:77998600-78002600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr4:77998600-78003600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:77998600-78004400 Weak transcription Placenta Placenta
9 chr4:77998600-78004600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:77998800-78001600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr4:77998800-78004600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr4:77998800-78005000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr4:77998800-78020600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr4:77999000-78002800 Enhancers Primary T cells from cord blood blood
15 chr4:77999200-78003200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr4:77999200-78003400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr4:77999200-78003800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr4:77999400-78001600 Weak transcription Primary B cells from cord blood blood
19 chr4:77999400-78001600 Weak transcription Primary hematopoietic stem cells blood
20 chr4:77999400-78001800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr4:77999400-78001800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr4:77999400-78002600 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr4:77999400-78004400 Weak transcription Fetal Lung lung
24 chr4:77999400-78005000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr4:77999400-78006600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr4:77999400-78012200 Weak transcription HMEC breast
27 chr4:77999600-78005000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr4:77999800-78001800 Weak transcription Primary B cells from peripheral blood blood
29 chr4:77999800-78001800 Weak transcription Fetal Thymus thymus
30 chr4:77999800-78003600 Weak transcription Fetal Muscle Leg muscle
31 chr4:77999800-78004800 Weak transcription NHEK skin
32 chr4:77999800-78010600 Weak transcription Fetal Muscle Trunk muscle
33 chr4:77999800-78013400 Weak transcription Thymus Thymus
34 chr4:78000000-78001600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr4:78000000-78001800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr4:78000000-78003600 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr4:78000000-78012200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:78000400-78001600 Strong transcription Fetal Stomach stomach
39 chr4:78000600-78001600 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr4:78000600-78001800 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr4:78000800-78003400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr4:78001000-78014800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr4:78001200-78001600 Weak transcription Primary T cells fromperipheralblood blood
44 chr4:78001400-78001600 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr4:78001400-78002400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr4:78001400-78002400 Enhancers Primary T helper cells PMA-I stimulated --
47 chr4:78001400-78002600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr4:78001400-78014400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015