Variant report

Variant	rs6851334
Chromosome Location	chr4:173060490-173060491
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:173058370..173063602-chr4:173075160..173078054,5	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10033775	1.00[EUR][1000 genomes]
rs1027760	1.00[EUR][1000 genomes]
rs1394855	1.00[EUR][1000 genomes]
rs1505481	1.00[EUR][1000 genomes]
rs1505493	1.00[EUR][1000 genomes]
rs184564	1.00[EUR][1000 genomes]
rs28602395	1.00[EUR][1000 genomes]
rs332991	1.00[EUR][1000 genomes]
rs59689241	1.00[EUR][1000 genomes]
rs60635348	1.00[EUR][1000 genomes]
rs6553606	1.00[EUR][1000 genomes]
rs72984395	1.00[EUR][1000 genomes]
rs72986322	1.00[EUR][1000 genomes]
rs72986325	1.00[EUR][1000 genomes]
rs72986326	1.00[EUR][1000 genomes]
rs72993076	1.00[EUR][1000 genomes]
rs73870120	1.00[EUR][1000 genomes]
rs73870121	1.00[EUR][1000 genomes]
rs7657360	1.00[EUR][1000 genomes]
rs7658535	1.00[EUR][1000 genomes]
rs7658765	1.00[EUR][1000 genomes]
rs7659496	1.00[EUR][1000 genomes]
rs7666355	1.00[EUR][1000 genomes]
rs7667747	1.00[EUR][1000 genomes]
rs7682225	1.00[EUR][1000 genomes]
rs7682833	1.00[EUR][1000 genomes]
rs7684124	1.00[EUR][1000 genomes]
rs7687749	1.00[EUR][1000 genomes]
rs7688928	1.00[EUR][1000 genomes]
rs995983	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022527	chr4:172547732-173236939	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537357	chr4:172547732-173236939	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1024693	chr4:172609237-173236939	Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv498033	chr4:172830955-173121438	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv830152	chr4:172906364-173087067	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv830153	chr4:173038006-173211957	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173051400-173062800	Weak transcription	NHDF-Ad	bronchial
2	chr4:173054800-173061200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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