Variant report

Variant	rs6968564
Chromosome Location	chr7:147184599-147184600
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs1015932	0.82[JPT][hapmap]
rs1018992	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1018995	0.88[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10500176	0.84[CEU][hapmap];0.80[JPT][hapmap]
rs10500181	0.82[CEU][hapmap]
rs10500184	0.82[CEU][hapmap]
rs10500186	0.83[CEU][hapmap];0.86[JPT][hapmap]
rs11974837	0.94[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap];0.87[YRI][hapmap]
rs11981369	0.94[CEU][hapmap];0.80[JPT][hapmap];0.85[YRI][hapmap]
rs11981922	0.94[CEU][hapmap];0.86[JPT][hapmap];0.90[YRI][hapmap]
rs12113127	0.84[CEU][hapmap]
rs12155219	0.83[CEU][hapmap]
rs12530837	0.94[CEU][hapmap];0.80[JPT][hapmap];0.95[YRI][hapmap]
rs12531159	0.83[CEU][hapmap]
rs12531630	0.82[CEU][hapmap]
rs12531963	0.94[CEU][hapmap];0.80[CHB][hapmap];0.80[JPT][hapmap];0.91[YRI][hapmap]
rs12532315	0.82[CEU][hapmap]
rs12536060	0.83[CEU][hapmap];0.80[JPT][hapmap]
rs12536336	0.83[CEU][hapmap]
rs12538269	0.89[CEU][hapmap];0.80[JPT][hapmap]
rs12539907	0.86[JPT][hapmap];0.95[YRI][hapmap]
rs12703904	0.85[JPT][hapmap]
rs12703906	0.80[JPT][hapmap]
rs13238589	0.83[CEU][hapmap]
rs13238822	0.83[CEU][hapmap]
rs13245441	0.94[CEU][hapmap];0.80[CHB][hapmap];0.86[JPT][hapmap];0.95[YRI][hapmap]
rs1404700	0.80[JPT][hapmap]
rs1404702	0.80[JPT][hapmap]
rs1528529	0.94[CEU][hapmap];0.86[JPT][hapmap];0.80[EUR][1000 genomes]
rs16883356	0.82[CEU][hapmap]
rs17170415	0.84[CEU][hapmap]
rs17170498	0.86[JPT][hapmap]
rs1987479	0.80[ASN][1000 genomes]
rs2286127	1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[JPT][hapmap];0.91[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2373130	0.94[CEU][hapmap];0.80[CHB][hapmap];0.85[YRI][hapmap]
rs4621717	0.94[CEU][hapmap];0.86[JPT][hapmap]
rs4726841	0.83[CEU][hapmap]
rs4726843	0.83[CEU][hapmap]
rs4726849	0.82[CEU][hapmap]
rs4726850	0.82[CEU][hapmap]
rs4726851	0.80[CEU][hapmap]
rs4726852	0.82[CEU][hapmap]
rs6945513	0.80[JPT][hapmap]
rs6945627	0.94[CEU][hapmap];0.80[CHB][hapmap];0.80[JPT][hapmap];0.83[YRI][hapmap]
rs6952525	0.84[CEU][hapmap];0.80[JPT][hapmap]
rs6954016	0.82[JPT][hapmap]
rs6972649	0.84[CEU][hapmap]
rs6973370	0.80[JPT][hapmap]
rs6973542	0.80[JPT][hapmap]
rs6976677	0.84[CEU][hapmap];0.80[JPT][hapmap]
rs6977497	0.83[CEU][hapmap];0.80[JPT][hapmap]
rs6977507	0.84[CEU][hapmap];0.80[JPT][hapmap]
rs6977519	0.83[CEU][hapmap];0.80[JPT][hapmap]
rs6977702	0.80[JPT][hapmap]
rs721123	0.83[CEU][hapmap];0.80[JPT][hapmap]
rs721124	0.84[CEU][hapmap];0.80[JPT][hapmap]
rs729565	0.82[CEU][hapmap]
rs7458418	0.89[CEU][hapmap];0.80[JPT][hapmap];0.96[YRI][hapmap]
rs747139	0.80[JPT][hapmap]
rs747140	0.80[JPT][hapmap]
rs899619	0.84[JPT][hapmap]
rs917127	0.94[CEU][hapmap];0.81[CHB][hapmap];0.80[JPT][hapmap]
rs9648846	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147183200-147188600	Weak transcription	Muscle Satellite Cultured Cells	--

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