Variant report
Variant | rs7006611 |
---|---|
Chromosome Location | chr8:66963026-66963027 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:66961909..66963523-chr8:66965574..66968530,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10100725 | 0.82[CEU][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs10113415 | 0.94[JPT][hapmap] |
rs11997605 | 0.94[JPT][hapmap] |
rs13252033 | 0.94[JPT][hapmap] |
rs13252592 | 0.82[CEU][hapmap];0.94[JPT][hapmap] |
rs13253380 | 0.94[JPT][hapmap] |
rs13257752 | 0.88[JPT][hapmap] |
rs13262438 | 0.81[ASN][1000 genomes] |
rs13264487 | 0.94[JPT][hapmap] |
rs13266516 | 0.94[JPT][hapmap] |
rs13276881 | 0.82[JPT][hapmap] |
rs13279522 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs13282248 | 0.94[JPT][hapmap] |
rs4262310 | 0.94[JPT][hapmap] |
rs4628244 | 0.94[JPT][hapmap] |
rs6472245 | 0.82[CEU][hapmap] |
rs6472246 | 0.82[CEU][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes] |
rs6472247 | 0.94[JPT][hapmap] |
rs6472248 | 0.94[JPT][hapmap] |
rs6990045 | 0.82[CEU][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes] |
rs6990839 | 0.94[JPT][hapmap] |
rs7006394 | 0.82[CEU][hapmap] |
rs7009913 | 0.94[JPT][hapmap] |
rs7010033 | 0.94[JPT][hapmap] |
rs7014971 | 0.94[JPT][hapmap] |
rs7016922 | 0.94[JPT][hapmap] |
rs7017358 | 0.94[JPT][hapmap] |
rs7824630 | 0.94[JPT][hapmap] |
rs7825257 | 0.94[JPT][hapmap] |
rs7827531 | 0.94[JPT][hapmap] |
rs7843077 | 0.94[JPT][hapmap] |
rs884839 | 0.94[JPT][hapmap] |
rs9298109 | 0.94[JPT][hapmap] |
rs9298110 | 0.94[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3446467 | chr8:66749863-67667068 | Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 73 gene(s) | inside rSNPs | diseases |
2 | esv3414665 | chr8:66936816-67381935 | Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:66962200-66963600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |