Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10100725	0.86[GIH][hapmap];0.91[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes]
rs10113415	0.91[JPT][hapmap]
rs11778990	0.83[ASN][1000 genomes]
rs11997605	0.91[JPT][hapmap];0.82[AMR][1000 genomes]
rs13252033	0.91[JPT][hapmap]
rs13252592	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs13253380	0.91[JPT][hapmap]
rs13256041	0.81[JPT][hapmap]
rs13257752	0.85[JPT][hapmap]
rs13264487	0.90[JPT][hapmap]
rs13266516	0.91[JPT][hapmap]
rs13279522	0.86[CEU][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes]
rs13282248	0.91[JPT][hapmap]
rs4262310	0.80[GIH][hapmap];0.90[JPT][hapmap];0.95[MEX][hapmap]
rs4628244	0.90[JPT][hapmap]
rs6472246	0.91[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap]
rs6472247	0.91[JPT][hapmap]
rs6472248	0.91[JPT][hapmap]
rs6990045	0.85[GIH][hapmap];0.91[JPT][hapmap];1.00[TSI][hapmap]
rs6990839	0.91[JPT][hapmap]
rs6999100	0.87[MEX][hapmap]
rs7006611	0.94[JPT][hapmap];0.87[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7009913	0.95[JPT][hapmap]
rs7010033	0.95[JPT][hapmap]
rs7014971	0.91[JPT][hapmap]
rs7016922	0.89[JPT][hapmap]
rs7017358	0.91[JPT][hapmap]
rs7824630	0.91[JPT][hapmap]
rs7825257	0.91[JPT][hapmap]
rs7827531	0.91[JPT][hapmap]
rs7843077	0.80[GIH][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap]
rs884839	0.80[GIH][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap]
rs9298110	0.90[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

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