Variant report

Variant	rs702703
Chromosome Location	chr5:57773526-57773527
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:57773280..57774222-chr5:58145796..58146822,4	MCF-7	breast:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs149135	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs154678	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1848511	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2548596	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2662621	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs702704	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702705	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702706	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702712	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702714	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702715	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702716	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702718	0.89[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs702724	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs832623	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832625	0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs832628	0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs832630	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs832633	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832634	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832635	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832637	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832638	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs832640	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57771400-57777000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:57771600-57774200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr5:57772400-57774400	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr5:57772600-57774200	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr5:57772800-57773600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:57772800-57774400	Enhancers	Primary B cells from peripheral blood	blood
7	chr5:57773000-57773600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr5:57773000-57774200	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr5:57773200-57785400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr5:57773400-57773800	Weak transcription	Ovary	ovary

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