The 2.0 version of rSNPBase

Variant report

Variant rs7029200
Chromosome Location chr9:108464428-108464429
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108457800-108472800 Weak transcription Spleen Spleen
2 chr9:108457800-108476200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:108457800-108492200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr9:108458000-108468400 Weak transcription Stomach Smooth Muscle stomach
5 chr9:108458000-108472400 Weak transcription HSMM muscle
6 chr9:108458000-108473000 Weak transcription Left Ventricle heart
7 chr9:108458000-108475200 Weak transcription Fetal Thymus thymus
8 chr9:108458000-108475600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr9:108458000-108475600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr9:108458000-108475600 Weak transcription Thymus Thymus
11 chr9:108458000-108476000 Weak transcription Ovary ovary
12 chr9:108458000-108479200 Weak transcription Fetal Brain Male brain
13 chr9:108458000-108497800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr9:108458200-108468400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr9:108458200-108468600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr9:108458200-108470600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr9:108458200-108476400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr9:108458200-108478800 Weak transcription Brain Hippocampus Middle brain
19 chr9:108458200-108480800 Weak transcription Brain Angular Gyrus brain
20 chr9:108458200-108491400 Weak transcription HSMMtube muscle
21 chr9:108458200-108491600 Weak transcription Brain Anterior Caudate brain
22 chr9:108458200-108495400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr9:108458200-108497000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr9:108458400-108470200 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr9:108458400-108470400 Weak transcription Liver Liver
26 chr9:108458600-108472600 Weak transcription Duodenum Mucosa Duodenum
27 chr9:108458800-108470600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr9:108459000-108468200 Weak transcription Fetal Muscle Leg muscle
29 chr9:108459000-108476000 Weak transcription Fetal Brain Female brain
30 chr9:108459200-108468600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr9:108459200-108472400 Weak transcription Dnd41 blood
32 chr9:108459200-108489400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr9:108459600-108470200 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr9:108461600-108465200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr9:108462000-108465000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr9:108462600-108472600 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr9:108463000-108464800 Enhancers Skeletal Muscle Male skeletal muscle
38 chr9:108463200-108478400 Weak transcription Hela-S3 cervix
39 chr9:108463200-108496800 Weak transcription HepG2 liver
40 chr9:108463400-108487600 Weak transcription Primary B cells from cord blood blood
41 chr9:108463600-108467800 Weak transcription Primary B cells from peripheral blood blood
42 chr9:108463800-108464600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr9:108463800-108464600 Weak transcription Fetal Heart heart
44 chr9:108463800-108464800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr9:108463800-108464800 Weak transcription GM12878-XiMat blood
46 chr9:108463800-108470600 Weak transcription Primary hematopoietic stem cells blood
47 chr9:108463800-108472400 Weak transcription K562 blood
48 chr9:108464000-108468400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr9:108464000-108468400 Weak transcription Small Intestine intestine
50 chr9:108464000-108474800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015