The 2.0 version of rSNPBase

Variant report

Variant rs7030619
Chromosome Location chr9:108462735-108462736
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108457800-108463200 Weak transcription Small Intestine intestine
2 chr9:108457800-108472800 Weak transcription Spleen Spleen
3 chr9:108457800-108476200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr9:108457800-108492200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr9:108458000-108468400 Weak transcription Stomach Smooth Muscle stomach
6 chr9:108458000-108472400 Weak transcription HSMM muscle
7 chr9:108458000-108473000 Weak transcription Left Ventricle heart
8 chr9:108458000-108475200 Weak transcription Fetal Thymus thymus
9 chr9:108458000-108475600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr9:108458000-108475600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr9:108458000-108475600 Weak transcription Thymus Thymus
12 chr9:108458000-108476000 Weak transcription Ovary ovary
13 chr9:108458000-108479200 Weak transcription Fetal Brain Male brain
14 chr9:108458000-108497800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr9:108458200-108468400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr9:108458200-108468600 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr9:108458200-108470600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr9:108458200-108476400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr9:108458200-108478800 Weak transcription Brain Hippocampus Middle brain
20 chr9:108458200-108480800 Weak transcription Brain Angular Gyrus brain
21 chr9:108458200-108491400 Weak transcription HSMMtube muscle
22 chr9:108458200-108491600 Weak transcription Brain Anterior Caudate brain
23 chr9:108458200-108495400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr9:108458200-108497000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr9:108458400-108463000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr9:108458400-108463000 Weak transcription Primary B cells from peripheral blood blood
27 chr9:108458400-108470200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr9:108458400-108470400 Weak transcription Liver Liver
29 chr9:108458600-108472600 Weak transcription Duodenum Mucosa Duodenum
30 chr9:108458800-108470600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr9:108459000-108468200 Weak transcription Fetal Muscle Leg muscle
32 chr9:108459000-108476000 Weak transcription Fetal Brain Female brain
33 chr9:108459200-108468600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr9:108459200-108472400 Weak transcription Dnd41 blood
35 chr9:108459200-108489400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr9:108459600-108463000 Weak transcription Psoas Muscle Psoas
37 chr9:108459600-108470200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr9:108459800-108462800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr9:108460400-108463000 Weak transcription GM12878-XiMat blood
40 chr9:108460600-108462800 Weak transcription HepG2 liver
41 chr9:108461200-108462800 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr9:108461200-108463800 Enhancers Primary hematopoietic stem cells blood
43 chr9:108461200-108463800 Enhancers Fetal Heart heart
44 chr9:108461400-108462800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr9:108461400-108464400 Enhancers Fetal Intestine Large intestine
46 chr9:108461600-108464400 Enhancers Fetal Intestine Small intestine
47 chr9:108461600-108465200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr9:108462000-108463000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr9:108462000-108465000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr9:108462200-108463800 Enhancers K562 blood

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Last update: Aug 31, 2015