The 2.0 version of rSNPBase

Variant report

Variant rs7858663
Chromosome Location chr9:108511629-108511630
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108498000-108511800 Weak transcription K562 blood
2 chr9:108498000-108513200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr9:108498200-108513400 Weak transcription HSMMtube muscle
4 chr9:108498400-108520000 Weak transcription Fetal Heart heart
5 chr9:108498400-108520400 Weak transcription Psoas Muscle Psoas
6 chr9:108498800-108514600 Weak transcription Small Intestine intestine
7 chr9:108499000-108513400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr9:108499200-108515000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr9:108499400-108513400 Weak transcription Stomach Smooth Muscle stomach
10 chr9:108499400-108514800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr9:108499400-108516000 Weak transcription Brain Anterior Caudate brain
12 chr9:108499400-108516000 Weak transcription Brain Cingulate Gyrus brain
13 chr9:108499800-108513400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr9:108499800-108513400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:108499800-108513400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr9:108499800-108514800 Weak transcription Fetal Kidney kidney
17 chr9:108500000-108513200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr9:108500000-108513400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr9:108500000-108513400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr9:108500200-108513400 Weak transcription Thymus Thymus
21 chr9:108500400-108513400 Weak transcription Right Ventricle heart
22 chr9:108500600-108513200 Weak transcription Fetal Muscle Leg muscle
23 chr9:108500600-108513400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr9:108500600-108513400 Weak transcription Esophagus oesophagus
25 chr9:108500600-108513400 Weak transcription Fetal Stomach stomach
26 chr9:108500600-108513400 Weak transcription Gastric stomach
27 chr9:108502200-108514800 Weak transcription Fetal Brain Male brain
28 chr9:108506200-108515000 Weak transcription Adipose Nuclei Adipose
29 chr9:108507400-108513400 Weak transcription Aorta Aorta
30 chr9:108508800-108513400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr9:108509200-108513400 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr9:108509200-108515800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr9:108509600-108514400 Weak transcription Colonic Mucosa Colon
34 chr9:108510000-108512600 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr9:108510000-108514600 Weak transcription Primary T cells fromperipheralblood blood
36 chr9:108510000-108515800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr9:108510000-108517000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
38 chr9:108510200-108511800 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr9:108510200-108512000 Strong transcription Primary T killer naive cells fromperipheralblood blood
40 chr9:108510200-108513400 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr9:108510200-108515000 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr9:108510200-108517000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr9:108510400-108511800 Strong transcription Fetal Brain Female brain
44 chr9:108510400-108512000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr9:108510400-108512400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr9:108510400-108512400 Strong transcription Fetal Intestine Large intestine
47 chr9:108510400-108512600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
48 chr9:108510400-108513800 Strong transcription Liver Liver
49 chr9:108510400-108514400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr9:108510400-108515400 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015