The 2.0 version of rSNPBase
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Variant report
Variant
rs7043966
Chromosome Location
chr9:96170097-96170098
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr9:96169162..96173033-chr9:96213587..96217020,4
MCF-7
breast:
No data
No data
No data
Variant related genes
Relation type
ENSG00000188938
Chromatin interaction
ENSG00000048828
Chromatin interaction
Extended variants information (count: 9 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:9)
rs_ID
r
2
[population]
rs16909145
0.90[ASN][1000 genomes]
rs16909202
0.90[ASN][1000 genomes]
rs16909214
0.90[ASN][1000 genomes]
rs16909243
0.90[ASN][1000 genomes]
rs16909308
0.90[ASN][1000 genomes]
rs6479486
0.90[ASN][1000 genomes]
rs7031483
0.90[ASN][1000 genomes]
rs7870558
0.90[ASN][1000 genomes]
rs7873803
0.90[ASN][1000 genomes]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links