Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10508715	0.84[ASN][1000 genomes]
rs11014995	0.80[ASN][1000 genomes]
rs11014996	0.83[ASN][1000 genomes]
rs1330581	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1999241	0.80[EUR][1000 genomes]
rs2236417	0.84[ASN][1000 genomes]
rs2236418	0.84[ASN][1000 genomes]
rs2368159	0.81[EUR][1000 genomes]
rs2368160	0.81[EUR][1000 genomes]
rs2839669	0.84[ASN][1000 genomes]
rs2839670	0.84[ASN][1000 genomes]
rs2839671	0.85[ASN][1000 genomes]
rs3758446	0.83[ASN][1000 genomes]
rs3781109	0.80[EUR][1000 genomes]
rs3781111	0.80[EUR][1000 genomes]
rs3781112	0.80[EUR][1000 genomes]
rs3847378	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4749101	0.80[EUR][1000 genomes]
rs4749102	0.80[EUR][1000 genomes]
rs4749105	0.80[EUR][1000 genomes]
rs61839365	0.83[ASN][1000 genomes]
rs6482550	0.80[EUR][1000 genomes]
rs7067571	0.80[EUR][1000 genomes]
rs7072136	0.84[ASN][1000 genomes]
rs7073119	0.81[EUR][1000 genomes]
rs7091779	0.80[EUR][1000 genomes]
rs7900739	0.81[EUR][1000 genomes]
rs7906725	0.80[EUR][1000 genomes]
rs7918935	0.80[EUR][1000 genomes]
rs8190582	0.84[ASN][1000 genomes]
rs8190598	0.85[ASN][1000 genomes]
rs8190683	0.80[EUR][1000 genomes]
rs8190748	0.80[EUR][1000 genomes]
rs992990	0.80[EUR][1000 genomes]
rs994502	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26502800-26508600	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr10:26505200-26510800	Bivalent/Poised TSS	Brain Anterior Caudate	brain
3	chr10:26505400-26508200	Bivalent/Poised TSS	Brain Germinal Matrix	brain
4	chr10:26505600-26510000	Bivalent/Poised TSS	Fetal Brain Female	brain
5	chr10:26507600-26508000	Bivalent/Poised TSS	Cortex derived primary cultured neurospheres	brain
6	chr10:26507600-26509000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
7	chr10:26507800-26508200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
8	chr10:26507800-26508800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell

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