Variant report

Variant	rs7084833
Chromosome Location	chr10:44251762-44251763
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11238709	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11238710	0.87[ASN][1000 genomes]
rs12356661	0.87[ASN][1000 genomes]
rs12357048	0.82[ASN][1000 genomes]
rs12359707	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12360144	0.82[ASN][1000 genomes]
rs17154237	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17154269	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17154294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17154300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17154313	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17154318	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17154325	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17154388	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1886723	0.82[ASN][1000 genomes]
rs2902564	0.87[ASN][1000 genomes]
rs35542796	0.86[EUR][1000 genomes]
rs4146639	0.93[EUR][1000 genomes]
rs55874105	0.82[ASN][1000 genomes]
rs56800667	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56935737	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57430423	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57720202	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58977619	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59003973	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59069351	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59235630	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59579985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59968020	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61528945	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61861582	0.86[ASN][1000 genomes]
rs61861583	0.87[ASN][1000 genomes]
rs73268420	0.85[ASN][1000 genomes]
rs73268460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73268466	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs871834	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44249600-44256800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44250600-44252000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
3	chr10:44250600-44252000	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
4	chr10:44250800-44251800	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
5	chr10:44251000-44251800	Enhancers	Fetal Lung	lung
6	chr10:44251400-44251800	Enhancers	H9 Cell Line	embryonic stem cell
7	chr10:44251600-44251800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links