Variant report

Variant	rs17154300
Chromosome Location	chr10:44245357-44245358
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10508870	0.81[ASN][1000 genomes]
rs10508871	0.81[ASN][1000 genomes]
rs10508872	0.81[ASN][1000 genomes]
rs11238641	0.81[ASN][1000 genomes]
rs11238646	0.83[ASN][1000 genomes]
rs11238709	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11238710	0.80[ASN][1000 genomes]
rs12356661	0.80[ASN][1000 genomes]
rs12359707	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs17154164	0.81[ASN][1000 genomes]
rs17154173	0.81[ASN][1000 genomes]
rs17154178	0.81[ASN][1000 genomes]
rs17154182	0.81[ASN][1000 genomes]
rs17154237	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17154269	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17154294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17154313	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154318	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17154325	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17154388	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2902564	0.80[ASN][1000 genomes]
rs35542796	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4146639	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56800667	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56935737	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57137545	0.81[ASN][1000 genomes]
rs57430423	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57517635	0.81[ASN][1000 genomes]
rs57720202	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58197647	0.81[ASN][1000 genomes]
rs58967637	0.81[ASN][1000 genomes]
rs58977619	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59003973	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59069351	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59124816	0.81[ASN][1000 genomes]
rs59228864	0.81[ASN][1000 genomes]
rs59235630	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59238114	0.81[ASN][1000 genomes]
rs59303606	0.81[ASN][1000 genomes]
rs59579985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59968020	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60580954	0.81[ASN][1000 genomes]
rs60799950	0.81[ASN][1000 genomes]
rs61185278	0.81[ASN][1000 genomes]
rs61405658	0.81[ASN][1000 genomes]
rs61528945	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61861583	0.80[ASN][1000 genomes]
rs7084833	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73266552	0.81[ASN][1000 genomes]
rs73266553	0.81[ASN][1000 genomes]
rs73266556	0.80[ASN][1000 genomes]
rs73266557	0.81[ASN][1000 genomes]
rs73266574	0.81[ASN][1000 genomes]
rs73268420	0.97[ASN][1000 genomes]
rs73268460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73268466	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899244	0.81[ASN][1000 genomes]
rs871834	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44242400-44246400	Enhancers	Fetal Muscle Leg	muscle
2	chr10:44244200-44245600	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr10:44244600-44245400	Enhancers	HSMM	muscle
4	chr10:44244800-44245400	Flanking Active TSS	Pancreas	Pancrea
5	chr10:44244800-44248600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:44245000-44245600	Enhancers	HSMMtube	muscle
7	chr10:44245200-44245400	Bivalent Enhancer	HepG2	liver
8	chr10:44245200-44246000	Enhancers	Skeletal Muscle Male	skeletal muscle

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