Variant report

Variant	rs56800667
Chromosome Location	chr10:44272947-44272948
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11238709	0.93[ASN][1000 genomes]
rs11238710	0.93[ASN][1000 genomes]
rs12356661	0.93[ASN][1000 genomes]
rs12357048	0.89[ASN][1000 genomes]
rs12359707	0.93[ASN][1000 genomes]
rs12360144	0.89[ASN][1000 genomes]
rs17154237	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17154294	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17154300	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17154313	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154318	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17154325	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17154388	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17154436	0.82[ASN][1000 genomes]
rs1886723	0.89[ASN][1000 genomes]
rs2902564	0.93[ASN][1000 genomes]
rs35542796	0.86[EUR][1000 genomes]
rs4146639	0.93[EUR][1000 genomes]
rs55874105	0.89[ASN][1000 genomes]
rs56935737	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57430423	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57720202	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58977619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59003973	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59069351	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59235630	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59579985	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59968020	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61528945	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61861582	0.92[ASN][1000 genomes]
rs61861583	0.93[ASN][1000 genomes]
rs7084833	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73268420	0.83[ASN][1000 genomes]
rs73268460	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73268466	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs871834	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44271200-44277000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44271200-44277400	Weak transcription	Spleen	Spleen
3	chr10:44271800-44274200	Weak transcription	Stomach Mucosa	stomach
4	chr10:44272000-44280800	Weak transcription	Right Atrium	heart
5	chr10:44272800-44274200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:44272800-44277000	Weak transcription	Pancreas	Pancrea

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