Variant report

Variant	rs7094465
Chromosome Location	chr10:50447095-50447096
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:50446994..50449831-chr10:50450885..50453374,2	K562	blood:
2	chr10:50446413..50449430-chr10:50451528..50453716,3	K562	blood:

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10745258	1.00[EUR][1000 genomes]
rs10776549	1.00[EUR][1000 genomes]
rs10776552	1.00[EUR][1000 genomes]
rs10776559	1.00[EUR][1000 genomes]
rs10776564	1.00[EUR][1000 genomes]
rs10857457	1.00[EUR][1000 genomes]
rs10857459	1.00[EUR][1000 genomes]
rs2377945	1.00[EUR][1000 genomes]
rs2377947	1.00[EUR][1000 genomes]
rs2377967	1.00[EUR][1000 genomes]
rs2377973	1.00[EUR][1000 genomes]
rs2377974	1.00[EUR][1000 genomes]
rs2889795	1.00[EUR][1000 genomes]
rs2889796	1.00[EUR][1000 genomes]
rs4012230	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4012231	1.00[EUR][1000 genomes]
rs4240502	1.00[EUR][1000 genomes]
rs4641382	1.00[EUR][1000 genomes]
rs4838374	1.00[EUR][1000 genomes]
rs4838380	1.00[EUR][1000 genomes]
rs4838382	1.00[EUR][1000 genomes]
rs4838471	1.00[EUR][1000 genomes]
rs4838477	1.00[EUR][1000 genomes]
rs4838478	1.00[EUR][1000 genomes]
rs4838488	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4838499	1.00[EUR][1000 genomes]
rs4838508	1.00[EUR][1000 genomes]
rs4838509	1.00[EUR][1000 genomes]
rs6537511	1.00[EUR][1000 genomes]
rs6537531	1.00[EUR][1000 genomes]
rs7068929	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7076165	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7078936	1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7080495	1.00[EUR][1000 genomes]
rs7082469	1.00[EUR][1000 genomes]
rs7084819	1.00[EUR][1000 genomes]
rs7085282	1.00[EUR][1000 genomes]
rs7088113	1.00[EUR][1000 genomes]
rs7094900	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7095890	1.00[EUR][1000 genomes]
rs7099166	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74130904	1.00[EUR][1000 genomes]
rs74133121	1.00[EUR][1000 genomes]
rs74133124	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7893653	1.00[EUR][1000 genomes]
rs7896694	1.00[EUR][1000 genomes]
rs7902727	1.00[EUR][1000 genomes]
rs7910727	1.00[EUR][1000 genomes]
rs7917742	1.00[EUR][1000 genomes]
rs7921186	1.00[TSI][hapmap]
rs7923632	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9663345	1.00[EUR][1000 genomes]
rs9665575	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50445200-50449800	Weak transcription	K562	blood
2	chr10:50445600-50450200	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr10:50446600-50447600	Weak transcription	Primary monocytes fromperipheralblood	blood

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