Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:65567727..65571769-chr14:65574635..65579781,8	MCF-7	breast:
2	chr14:65568317..65571529-chr14:65572429..65574819,6	K562	blood:
3	chr14:65568317..65571554-chr14:65571608..65574819,5	K562	blood:

Variant related genes	Relation type
ENSG00000125952	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10142987	0.82[CHB][hapmap]
rs10149182	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs11626796	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs12101257	0.83[CHB][hapmap]
rs1256415	1.00[CEU][hapmap]
rs1256416	1.00[CEU][hapmap]
rs12588378	0.82[CHB][hapmap]
rs12588412	0.84[EUR][1000 genomes]
rs12895232	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs1953230	1.00[CEU][hapmap];0.82[CHB][hapmap];0.80[ASN][1000 genomes]
rs1953231	1.00[CEU][hapmap];0.82[CHB][hapmap];0.80[ASN][1000 genomes]
rs1953233	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2225676	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs2277500	1.00[CEU][hapmap];0.82[CHB][hapmap]
rs2411995	0.97[ASN][1000 genomes]
rs2781371	1.00[CEU][hapmap];0.83[CHB][hapmap];0.80[ASN][1000 genomes]
rs8007110	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs8007538	0.82[CHB][hapmap]
rs8011293	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8181931	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs945013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs945014	0.89[CHB][hapmap];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65572400-65575000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr14:65572800-65574800	Enhancers	Primary hematopoietic stem cells	blood
3	chr14:65573200-65574800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr14:65574200-65574800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr14:65574600-65574800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr14:65574600-65575200	Enhancers	K562	blood

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