Variant report
| Variant | rs71605121 |
|---|---|
| Chromosome Location | chr4:97430184-97430185 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs10007639 | 0.92[ASN][1000 genomes] |
| rs10016381 | 0.92[ASN][1000 genomes] |
| rs10018992 | 0.92[ASN][1000 genomes] |
| rs12498214 | 0.92[ASN][1000 genomes] |
| rs12507410 | 0.92[ASN][1000 genomes] |
| rs12510118 | 0.92[ASN][1000 genomes] |
| rs12512170 | 1.00[ASN][1000 genomes] |
| rs12512573 | 0.92[ASN][1000 genomes] |
| rs17025428 | 0.92[ASN][1000 genomes] |
| rs28418878 | 0.92[ASN][1000 genomes] |
| rs28433709 | 0.92[ASN][1000 genomes] |
| rs28526823 | 0.92[ASN][1000 genomes] |
| rs28626069 | 0.92[ASN][1000 genomes] |
| rs28790115 | 0.92[ASN][1000 genomes] |
| rs34023952 | 0.81[EUR][1000 genomes] |
| rs34373785 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs35070094 | 0.81[EUR][1000 genomes] |
| rs62316847 | 0.92[ASN][1000 genomes] |
| rs62316848 | 0.92[ASN][1000 genomes] |
| rs6815914 | 0.92[ASN][1000 genomes] |
| rs6817554 | 0.92[ASN][1000 genomes] |
| rs6830209 | 0.92[ASN][1000 genomes] |
| rs7682601 | 0.92[ASN][1000 genomes] |
| rs9307172 | 0.92[ASN][1000 genomes] |
| rs9884206 | 0.92[ASN][1000 genomes] |
| rs9884371 | 0.92[ASN][1000 genomes] |
| rs9884399 | 0.92[ASN][1000 genomes] |
| rs9997459 | 0.92[ASN][1000 genomes] |
| rs9998679 | 0.92[ASN][1000 genomes] |
| rs9998994 | 0.92[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv879634 | chr4:97371381-97727113 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 2 | nsv879635 | chr4:97389090-97591085 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 3 | nsv1007650 | chr4:97393803-97485770 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:97430000-97430800 | Flanking Active TSS | Dnd41 | blood |
