Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10007639	1.00[ASN][1000 genomes]
rs10016381	1.00[ASN][1000 genomes]
rs10018992	1.00[ASN][1000 genomes]
rs10022681	1.00[ASN][1000 genomes]
rs10856920	1.00[ASN][1000 genomes]
rs12500252	1.00[ASN][1000 genomes]
rs12501335	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs12507410	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12509073	0.86[ASN][1000 genomes]
rs12510118	1.00[ASN][1000 genomes]
rs12512170	0.92[ASN][1000 genomes]
rs12512573	1.00[ASN][1000 genomes]
rs1395200	1.00[ASN][1000 genomes]
rs1506314	0.81[ASN][1000 genomes]
rs17025428	1.00[ASN][1000 genomes]
rs1857891	1.00[ASN][1000 genomes]
rs28418878	1.00[ASN][1000 genomes]
rs28433709	1.00[ASN][1000 genomes]
rs28526823	1.00[ASN][1000 genomes]
rs28600943	1.00[ASN][1000 genomes]
rs28626069	1.00[ASN][1000 genomes]
rs28790115	1.00[ASN][1000 genomes]
rs57196872	1.00[ASN][1000 genomes]
rs62316847	1.00[ASN][1000 genomes]
rs62316848	1.00[ASN][1000 genomes]
rs6815914	1.00[ASN][1000 genomes]
rs6817554	1.00[ASN][1000 genomes]
rs6830209	1.00[ASN][1000 genomes]
rs6852164	1.00[ASN][1000 genomes]
rs71605121	0.92[ASN][1000 genomes]
rs7682601	1.00[ASN][1000 genomes]
rs9307172	1.00[ASN][1000 genomes]
rs9884206	1.00[ASN][1000 genomes]
rs9884371	1.00[ASN][1000 genomes]
rs9884399	1.00[ASN][1000 genomes]
rs9997459	1.00[ASN][1000 genomes]
rs9998679	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9998994	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470057	chr4:97104880-97311657	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv461589	chr4:97104881-97311657	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv594916	chr4:97104881-97311657	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv879632	chr4:97118539-97308914	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97274000-97284600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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