Variant report

Variant	rs71630704
Chromosome Location	chr5:94513346-94513347
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10044143	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10050382	0.83[ASN][1000 genomes]
rs10057040	0.82[ASN][1000 genomes]
rs10060946	0.82[ASN][1000 genomes]
rs10064420	0.82[ASN][1000 genomes]
rs10066492	0.82[ASN][1000 genomes]
rs10067492	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10068165	0.82[ASN][1000 genomes]
rs10068954	0.82[ASN][1000 genomes]
rs10069998	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10072003	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10073182	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10073184	0.82[ASN][1000 genomes]
rs10073604	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10075123	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10077145	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10079049	0.87[ASN][1000 genomes]
rs10515223	0.82[ASN][1000 genomes]
rs13163584	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs154062	0.82[ASN][1000 genomes]
rs154063	0.82[ASN][1000 genomes]
rs154064	0.82[ASN][1000 genomes]
rs17349336	0.82[ASN][1000 genomes]
rs3104738	0.82[ASN][1000 genomes]
rs35698400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs36100739	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56244253	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71630703	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71630705	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71630706	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7349800	0.87[ASN][1000 genomes]
rs73776337	0.82[ASN][1000 genomes]
rs9314133	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94509200-94513600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:94511800-94513600	Weak transcription	Fetal Thymus	thymus
3	chr5:94513000-94513400	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr5:94513000-94514000	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr5:94513000-94514600	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr5:94513000-94516200	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr5:94513200-94513400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr5:94513200-94513400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr5:94513200-94513600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr5:94513200-94513600	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr5:94513200-94513600	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr5:94513200-94513800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr5:94513200-94514000	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr5:94513200-94514000	Flanking Active TSS	Dnd41	blood
15	chr5:94513200-94514200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr5:94513200-94514400	Enhancers	H1 Cell Line	embryonic stem cell
17	chr5:94513200-94514400	Enhancers	H9 Cell Line	embryonic stem cell
18	chr5:94513200-94514400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr5:94513200-94514400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr5:94513200-94514600	Enhancers	NH-A	brain
21	chr5:94513200-94515000	Enhancers	Muscle Satellite Cultured Cells	--
22	chr5:94513200-94515000	Enhancers	HUVEC	blood vessel

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